RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 CA1P00915 261 aaPredicted RBP13.75□□□□□ -0.21
PTPRU-211ENST00000531385 ORM2P19652 201 aa13.75□□□□□ -0.21
PTPRU-211ENST00000531385 DEFB1P60022 68 aa13.75□□□□□ -0.21
PTPRU-211ENST00000531385 S100A10P60903 97 aa13.75□□□□□ -0.21
PTPRU-211ENST00000531385 ACTL10Q5JWF8 245 aa13.75□□□□□ -0.21
PTPRU-211ENST00000531385 CYP2G1PQ6ZSU1 146 aa13.75□□□□□ -0.21
PTPRU-211ENST00000531385 C2orf50Q96LR7 162 aa13.75□□□□□ -0.21
PTPRU-211ENST00000531385 TP53TG1Q9Y2A0 90 aa13.75□□□□□ -0.21
PTPRU-211ENST00000531385 L7N2F9 121 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 IL5P05113 134 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 NUP62P37198 522 aaPredicted RBP13.74□□□□□ -0.21
PTPRU-211ENST00000531385 AP2S1P53680 142 aaPredicted RBP13.74□□□□□ -0.21
PTPRU-211ENST00000531385 TAS2R30P59541 319 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 VAMP2P63027 116 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 DLK1P80370 383 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 SLC38A11Q08AI6 406 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 BPIFCQ8NFQ6 507 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 OR10P1Q8NGE3 313 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 OR1B1Q8NGR6 318 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 C11orf1Q9H5F2 150 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 SLC25A22Q9H936 323 aa13.74□□□□□ -0.21
PTPRU-211ENST00000531385 SIX6O95475 246 aa13.73□□□□□ -0.21
PTPRU-211ENST00000531385 BCAP31P51572 246 aa13.73□□□□□ -0.21
PTPRU-211ENST00000531385 TRPT1Q86TN4 253 aaKnown RBP13.73□□□□□ -0.21
PTPRU-211ENST00000531385 SCRT1Q9BWW7 348 aa13.73□□□□□ -0.21
PTPRU-211ENST00000531385 SLC25A32Q9H2D1 315 aa13.73□□□□□ -0.21
PTPRU-211ENST00000531385 FAM24AA6NFZ4 105 aa13.72□□□□□ -0.21
PTPRU-211ENST00000531385 CST7O76096 145 aa13.72□□□□□ -0.21
PTPRU-211ENST00000531385 GIG44P09565 113 aaPredicted RBP13.72□□□□□ -0.21
PTPRU-211ENST00000531385 C4BPBP20851 252 aa13.72□□□□□ -0.21
PTPRU-211ENST00000531385 CAV2P51636 162 aa13.72□□□□□ -0.21
PTPRU-211ENST00000531385 RAB32Q13637 225 aa13.72□□□□□ -0.21
PTPRU-211ENST00000531385 OR8I2Q8N0Y5 310 aa13.72□□□□□ -0.21
PTPRU-211ENST00000531385 MGAT4CQ9UBM8 478 aa13.72□□□□□ -0.21
PTPRU-211ENST00000531385 PFDN2Q9UHV9 154 aa13.72□□□□□ -0.21
PTPRU-211ENST00000531385 ZNF98A6NK75 572 aa13.71□□□□□ -0.21
PTPRU-211ENST00000531385 INMT-MINDY4F8WBC2 141 aa13.71□□□□□ -0.21
PTPRU-211ENST00000531385 GOSR2O14653 212 aa13.71□□□□□ -0.21
PTPRU-211ENST00000531385 LINC00869P0C866 280 aa13.71□□□□□ -0.21
PTPRU-211ENST00000531385 SNRPD3P62318 126 aaKnown RBP13.71□□□□□ -0.21
PTPRU-211ENST00000531385 IL15RAQ13261 267 aa13.71□□□□□ -0.21
PTPRU-211ENST00000531385 PLECQ15149 4684 aaKnown RBP13.71□□□□□ -0.21
PTPRU-211ENST00000531385 TMEM147Q9BVK8 224 aa13.71□□□□□ -0.21
PTPRU-211ENST00000531385 TENM2Q9NT68 2774 aa13.71□□□□□ -0.22
PTPRU-211ENST00000531385 SOCS3O14543 225 aa13.7□□□□□ -0.22
PTPRU-211ENST00000531385 CFDP00746 253 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-211ENST00000531385 C1orf194Q5T5A4 169 aa13.7□□□□□ -0.22
PTPRU-211ENST00000531385 GDF5OSQ5U4N7 250 aa13.7□□□□□ -0.22
PTPRU-211ENST00000531385 TMEM217Q8N7C4 229 aa13.7□□□□□ -0.22
PTPRU-211ENST00000531385 LINC00052Q96N35 136 aa13.7□□□□□ -0.22
PTPRU-211ENST00000531385 GPN1Q9HCN4 374 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-211ENST00000531385 FBXL17Q9UF56 701 aa13.7□□□□□ -0.22
PTPRU-211ENST00000531385 IGSF23A1L1A6 192 aa13.69□□□□□ -0.22
PTPRU-211ENST00000531385 PMS2P11Q13670 270 aa13.69□□□□□ -0.22
PTPRU-211ENST00000531385 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
PTPRU-211ENST00000531385 C17orf77Q96MU5 243 aa13.69□□□□□ -0.22
PTPRU-211ENST00000531385 UHRF2Q96PU4 802 aa13.69□□□□□ -0.22
PTPRU-211ENST00000531385 NPVFQ9HCQ7 196 aa13.69□□□□□ -0.22
PTPRU-211ENST00000531385 CLEC5AQ9NY25 188 aa13.69□□□□□ -0.22
PTPRU-211ENST00000531385 RYR2Q92736 4967 aa13.69□□□□□ -0.22
PTPRU-211ENST00000531385 LYSTQ99698 3801 aa13.69□□□□□ -0.22
PTPRU-211ENST00000531385 FNDC10F2Z333 226 aa13.68□□□□□ -0.22
PTPRU-211ENST00000531385 H3BRN7 92 aa13.68□□□□□ -0.22
PTPRU-211ENST00000531385 OR5G3P0C626 314 aa13.68□□□□□ -0.22
PTPRU-211ENST00000531385 TEPPQ6URK8 271 aa13.68□□□□□ -0.22
PTPRU-211ENST00000531385 IL17DQ8TAD2 202 aa13.68□□□□□ -0.22
PTPRU-211ENST00000531385 RARRES2Q99969 163 aa13.68□□□□□ -0.22
PTPRU-211ENST00000531385 RSG1Q9BU20 258 aa13.68□□□□□ -0.22
PTPRU-211ENST00000531385 SLC25A39Q9BZJ4 359 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-211ENST00000531385 SLC45A2Q9UMX9 530 aa13.68□□□□□ -0.22
PTPRU-211ENST00000531385 HIGD1AQ9Y241 93 aa13.68□□□□□ -0.22
PTPRU-211ENST00000531385 AGPAT2O15120 278 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 DEFB4AO15263 64 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 HYPMO75409 117 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 DEDDO75618 318 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 IGKV3-20P01619 116 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 DEFA1P59665 94 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 DEFA3P59666 94 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 GATAD1Q8WUU5 269 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 C20orf173Q96LM9 149 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 MGST2Q99735 147 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 MARVELD1Q9BSK0 173 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 ARL6Q9H0F7 186 aa13.67□□□□□ -0.22
PTPRU-211ENST00000531385 F6UB75 175 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 H3BMM0 161 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 PRAF2O60831 178 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 SPP1P10451 314 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 PVALBP20472 110 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-211ENST00000531385 GALR1P47211 349 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 PSMB3P49720 205 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 RAP2BP61225 183 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 SELENOTP62341 195 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 LRRC37A5PQ49AS3 106 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 IGFL4Q6B9Z1 124 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 PATE2Q6UY27 113 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 TMEM252Q8N6L7 170 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 SHANK2-AS3Q9BTD1 123 aa13.66□□□□□ -0.22
PTPRU-211ENST00000531385 SEPSECSQ9HD40 501 aaKnown RBP13.66□□□□□ -0.22
PTPRU-211ENST00000531385 LYRM2Q9NU23 88 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms