RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 SRRM5B3KS81 715 aa7□□□□□ -1.29
CTNND1-221ENST00000529873 FGF16O43320 207 aa7□□□□□ -1.29
CTNND1-221ENST00000529873 SERF1AO75920 110 aa7□□□□□ -1.29
CTNND1-221ENST00000529873 ZCCHC24Q8N2G6 241 aaKnown RBP7□□□□□ -1.29
CTNND1-221ENST00000529873 FAM19A2Q8N3H0 131 aa7□□□□□ -1.29
CTNND1-221ENST00000529873 Q9UFV3 132 aa7□□□□□ -1.29
CTNND1-221ENST00000529873 TSKUQ8WUA8 353 aa7□□□□□ -1.29
CTNND1-221ENST00000529873 VSIRQ9H7M9 311 aa7□□□□□ -1.29
CTNND1-221ENST00000529873 DOCK4Q8N1I0 1966 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 TRGV4A0A0C4DH28 118 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 MST1P26927 711 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 GATD1Q8NB37 220 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 CD28P10747 220 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 KLRD1Q13241 179 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 FAM223BA6NKX1 122 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 CD300EQ496F6 205 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-221ENST00000529873 TREML4Q6UXN2 200 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 FAM223AQ8IWN6 122 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 RPUSD1Q9UJJ7 312 aaKnown RBP6.99□□□□□ -1.29
CTNND1-221ENST00000529873 A0A1B0GW64 132 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 GNLYP22749 145 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 CRYBA4P53673 196 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 TRGV9Q99603 122 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 B5MCH6 92 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 PLEKHB2Q96CS7 222 aa6.99□□□□□ -1.29
CTNND1-221ENST00000529873 SCN8AQ9UQD0 1980 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 DOCK3Q8IZD9 2030 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 MYO7AQ13402 2215 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 H0YJW9 148 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 EVI2AP22794 236 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 PYY3Q5JQD4 70 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 MESP1Q9BRJ9 268 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 WDR83OSQ9Y284 106 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 SBF1O95248 1867 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 ANK1P16157 1881 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 SDK1Q7Z5N4 2213 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 IGKV2-40A0A087WW87 121 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-221ENST00000529873 TRBV6-6A0A0A6YYG2 114 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 IGKV3D-20A0A0C4DH25 116 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 ADARB2-AS1A8MUL3 147 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 IGKV2D-40P01614 121 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-221ENST00000529873 LINC00158P58513 81 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 SLC25A39Q9BZJ4 359 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-221ENST00000529873 CNTRLQ7Z7A1 2325 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 H0YIZ8 118 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 HEPN1Q6WQI6 88 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 PRADC1Q9BSG0 188 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 ANAPC10Q9UM13 185 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 KLF12Q9Y4X4 402 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 BUB1B-PAK6H3BSN5 160 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 SAP30O75446 220 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 SPSB3Q6PJ21 355 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 C1orf122Q6ZSJ8 110 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 VGLL1Q99990 258 aa6.98□□□□□ -1.29
CTNND1-221ENST00000529873 MBD3L4A6NDZ8 208 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-221ENST00000529873 MBD3L3A6NE82 208 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-221ENST00000529873 MBD3L5A6NJ08 208 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-221ENST00000529873 B3GALT5-AS1P59052 145 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 LAGE3Q14657 143 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 MBD3L2Q8NHZ7 208 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-221ENST00000529873 OCC1Q8TAD7 63 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 GAGE12HA6NDE8 117 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 SRD5A1P18405 259 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 HOXD3P31249 432 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-221ENST00000529873 SNHG12Q9BXW3 62 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 TSSC4Q9Y5U2 329 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-221ENST00000529873 CACNA1CQ13936 2221 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 FOXG1P55316 489 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-221ENST00000529873 Q6P435 159 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 LHFPL1Q86WI0 220 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 C15orf32Q32M92 178 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 SPATA31B1PQ5VZV4 182 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 DTX1Q86Y01 620 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 IFI27L1Q96BM0 104 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 MRPL55Q7Z7F7 128 aaKnown RBP6.97□□□□□ -1.29
CTNND1-221ENST00000529873 ZNF664Q8N3J9 261 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 RCHY1Q96PM5 261 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 TMEM242Q9NWH2 141 aa6.97□□□□□ -1.29
CTNND1-221ENST00000529873 SCN5AQ14524 2016 aa6.96□□□□□ -1.29
CTNND1-221ENST00000529873 FOXL2NBQ6ZUU3 175 aa6.96□□□□□ -1.29
CTNND1-221ENST00000529873 WFDC12Q8WWY7 111 aa6.96□□□□□ -1.29
CTNND1-221ENST00000529873 B4DSR2 109 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 INAFM2P0DMQ5 153 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 RPL15P61313 204 aaKnown RBP6.96□□□□□ -1.3
CTNND1-221ENST00000529873 TEX38Q6PEX7 206 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 GREB1Q4ZG55 1949 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 HIST1H2BKO60814 126 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 IGHG3P01860 377 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 HIST1H2BJP06899 126 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 HIST1H2BOP23527 126 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 HIST1H2BBP33778 126 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 HIST1H2BDP58876 126 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 HIST1H2BCP62807 126 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 HIST2H2BEQ16778 126 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-221ENST00000529873 TMEM219Q86XT9 240 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 HIST1H2BHQ93079 126 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 HIST1H2BNQ99877 126 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms