RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 ATG5Q9H1Y0 275 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM14BQ9NUH8 114 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 LSM2Q9Y333 95 aaKnown RBP2.51□□□□□ -2.01
PTPRC-213ENST00000529828 URGCP-MRPS24S4R325 110 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 V9GY05 133 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 KRBOX1C9JBD0 128 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 SMLR1H3BR10 107 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 SLC22A5O76082 557 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 METTL15P1P0C7V9 234 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 SPP1P10451 314 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 NPY1RP25929 384 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 FCGR2CP31995 323 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 FUSP35637 526 aaKnown RBP eCLIP2.51□□□□□ -2.01
PTPRC-213ENST00000529828 FXYD7P58549 80 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 TAS2R31P59538 309 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 FABP5Q01469 135 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 RAB32Q13637 225 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 SPHARQ15513 63 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 COX19Q49B96 90 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 SPINK9Q5DT21 86 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 AADACL3Q5VUY0 350 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 LPCAT3Q6P1A2 487 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM88Q6PEY1 159 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 TOMM20LQ6UXN7 152 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 Q6ZS49 121 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 TMED4Q7Z7H5 227 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 CSNK1G2-AS1Q8NCQ2 148 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 OR4C5Q8NGB2 326 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 OR1L8Q8NGR8 309 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 RNASE8Q8TDE3 154 aaKnown RBP2.51□□□□□ -2.01
PTPRC-213ENST00000529828 C15orf40Q8WUR7 153 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 DEDD2Q8WXF8 326 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 LSM10Q969L4 123 aaKnown RBP2.51□□□□□ -2.01
PTPRC-213ENST00000529828 OR10C1Q96KK4 312 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 NXF2Q9GZY0 626 aaKnown RBP2.51□□□□□ -2.01
PTPRC-213ENST00000529828 GSKIPQ9P0R6 139 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 OR51B2Q9Y5P1 312 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 I3L2K1 104 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 RGS5O15539 181 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 GNG7O60262 68 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 ARL6IP5O75915 188 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 PTTG1O95997 202 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 MT-CO2P00403 227 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 HPRT1P00492 218 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 IGKV3-20P01619 116 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 RLN1P04808 185 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 INAFM2P0DMQ5 153 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 HOXA5P20719 270 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 HLA-DMAP28067 261 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 G6PCP35575 357 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 MFAP4P55083 255 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 DEFB1P60022 68 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 ERVK-16P61578 105 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 ZFP69Q49AA0 526 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 PSMG4Q5JS54 123 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 MORN3Q6PF18 240 aaPredicted RBP2.5□□□□□ -2.01
PTPRC-213ENST00000529828 CNIH2Q6PI25 160 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 GSG1LQ6UXU4 331 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 IZUMO2Q6UXV1 221 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF818PQ6ZRF7 136 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 PRSS48Q7RTY5 328 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 S100ZQ8WXG8 99 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 SRSF8Q9BRL6 282 aaKnown RBP2.5□□□□□ -2.01
PTPRC-213ENST00000529828 GINS3Q9BRX5 216 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 DCSTAMPQ9H295 470 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 MIXL1Q9H2W2 232 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 VSIRQ9H7M9 311 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 NDUFA4L2Q9NRX3 87 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 ANXA10Q9UJ72 324 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 FLVCR2Q9UPI3 526 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 NACAE9PAV3 2078 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 A0A1B0GU03 582 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 C5orf52A6NGY3 159 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 EPM2AB3EWF7 344 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 TSTD3H0UI37 97 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 K7EQG2 157 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 M0R036 132 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 GOSR2O14653 212 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 EIF3GO75821 320 aaKnown RBP eCLIP2.5□□□□□ -2.01
PTPRC-213ENST00000529828 KRASP01116 189 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 PPYP01298 95 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 IFNA5P01569 189 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 KRTAP10-2P60368 255 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 DLK1P80370 383 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 CD300CQ08708 224 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 FGL1Q08830 312 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 CATR1Q13166 79 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 DHRS2Q13268 280 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 BTN1A1Q13410 526 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF846Q147U1 533 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 POU2AF1Q16633 256 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 FAM222AQ5U5X8 452 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF546Q86UE3 836 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 C6orf223Q8N319 242 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 C12orf45Q8N5I9 185 aaPredicted RBP2.5□□□□□ -2.01
PTPRC-213ENST00000529828 EIF4E3Q8N5X7 224 aaKnown RBP2.5□□□□□ -2.01
PTPRC-213ENST00000529828 DUSP18Q8NEJ0 188 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 RAB2BQ8WUD1 216 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 MOB3AQ96BX8 217 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 ATG101Q9BSB4 218 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms