RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 CD5P06127 495 aa8.95□□□□□ -0.98
USH1C-208ENST00000529563 NPPCP23582 126 aa8.95□□□□□ -0.98
USH1C-208ENST00000529563 RAB31Q13636 194 aa8.95□□□□□ -0.98
USH1C-208ENST00000529563 GAMTQ14353 236 aa8.95□□□□□ -0.98
USH1C-208ENST00000529563 ZNF124Q15973 351 aa8.95□□□□□ -0.98
USH1C-208ENST00000529563 LGALS9CQ6DKI2 356 aa8.95□□□□□ -0.98
USH1C-208ENST00000529563 TCF24Q7RTU0 167 aa8.95□□□□□ -0.98
USH1C-208ENST00000529563 THAP6Q8TBB0 222 aa8.95□□□□□ -0.98
USH1C-208ENST00000529563 GRAMD2BQ96HH9 432 aa8.95□□□□□ -0.98
USH1C-208ENST00000529563 METTL26Q96S19 204 aa8.95□□□□□ -0.98
USH1C-208ENST00000529563 F8W735 103 aaPredicted RBP8.94□□□□□ -0.98
USH1C-208ENST00000529563 EIF2B2P49770 351 aaKnown RBP8.94□□□□□ -0.98
USH1C-208ENST00000529563 YPEL3P61236 119 aaPredicted RBP8.94□□□□□ -0.98
USH1C-208ENST00000529563 FGL1Q08830 312 aa8.94□□□□□ -0.98
USH1C-208ENST00000529563 OXA1LQ15070 435 aa8.94□□□□□ -0.98
USH1C-208ENST00000529563 ACOT7LQ6ZUV0 252 aa8.94□□□□□ -0.98
USH1C-208ENST00000529563 S100A7AQ86SG5 101 aa8.94□□□□□ -0.98
USH1C-208ENST00000529563 C2CD4CQ8TF44 421 aa8.94□□□□□ -0.98
USH1C-208ENST00000529563 TMEM170AQ8WVE7 144 aa8.94□□□□□ -0.98
USH1C-208ENST00000529563 PPP1R1CQ8WVI7 109 aa8.94□□□□□ -0.98
USH1C-208ENST00000529563 PBDC1Q9BVG4 233 aa8.94□□□□□ -0.98
USH1C-208ENST00000529563 NPVFQ9HCQ7 196 aa8.94□□□□□ -0.98
USH1C-208ENST00000529563 RABAC1Q9UI14 185 aa8.94□□□□□ -0.98
USH1C-208ENST00000529563 IGHV3-66A0A0C4DH42 116 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 FAM24AA6NFZ4 105 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 DEFB4AO15263 64 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 CST7O76096 145 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 IL4P05112 153 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 IGLC1P0CG04 106 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 S100A11P31949 105 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 DLK1P80370 383 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 SLC38A11Q08AI6 406 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 TOMM20LQ6UXN7 152 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 STHQ8IWL8 128 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 BPIFCQ8NFQ6 507 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 OR51G1Q8NGK1 321 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 GGACTQ9BVM4 153 aa8.93□□□□□ -0.98
USH1C-208ENST00000529563 C11orf68Q9H3H3 251 aaKnown RBP8.93□□□□□ -0.98
USH1C-208ENST00000529563 TOMM40O96008 361 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 CFDP00746 253 aaPredicted RBP8.92□□□□□ -0.98
USH1C-208ENST00000529563 P2RY1P47900 373 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 SULT1A1P50225 295 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 PAX9P55771 341 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 H2BFSP57053 126 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 DEFB131AP59861 70 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 LYZP61626 148 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 OR2F1Q13607 317 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 FCN2Q15485 313 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 LEMD1Q68G75 181 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 TMEM14EPQ6UXP3 125 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 ASB13Q8WXK3 278 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 ST8SIA2Q92186 375 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 LYRM2Q9NU23 88 aaPredicted RBP8.92□□□□□ -0.98
USH1C-208ENST00000529563 UQCC1Q9NVA1 299 aa8.92□□□□□ -0.98
USH1C-208ENST00000529563 MRPL36Q9P0J6 103 aaKnown RBP8.92□□□□□ -0.98
USH1C-208ENST00000529563 IGLL5B9A064 214 aa8.91□□□□□ -0.98
USH1C-208ENST00000529563 DFFBO76075 338 aa8.91□□□□□ -0.98
USH1C-208ENST00000529563 HNRNPCP07910 306 aaKnown RBP eCLIP8.91□□□□□ -0.98
USH1C-208ENST00000529563 PSG1P11464 419 aa8.91□□□□□ -0.98
USH1C-208ENST00000529563 ATP6V1FQ16864 119 aa8.91□□□□□ -0.98
USH1C-208ENST00000529563 TEPPQ6URK8 271 aa8.91□□□□□ -0.98
USH1C-208ENST00000529563 TMEM144Q7Z5S9 345 aa8.91□□□□□ -0.98
USH1C-208ENST00000529563 TMEM252Q8N6L7 170 aa8.91□□□□□ -0.98
USH1C-208ENST00000529563 STXBP6Q8NFX7 210 aa8.91□□□□□ -0.98
USH1C-208ENST00000529563 TRGV9Q99603 122 aa8.91□□□□□ -0.98
USH1C-208ENST00000529563 MS4A6AQ9H2W1 248 aa8.91□□□□□ -0.98
USH1C-208ENST00000529563 FNDC10F2Z333 226 aa8.9□□□□□ -0.98
USH1C-208ENST00000529563 MPC2O95563 127 aa8.9□□□□□ -0.98
USH1C-208ENST00000529563 IGKV1-17P01599 117 aa8.9□□□□□ -0.98
USH1C-208ENST00000529563 RAP2BP61225 183 aa8.9□□□□□ -0.98
USH1C-208ENST00000529563 SELENOTP62341 195 aa8.9□□□□□ -0.98
USH1C-208ENST00000529563 BAXQ07812 192 aa8.9□□□□□ -0.98
USH1C-208ENST00000529563 ZNF709Q8N972 641 aa8.9□□□□□ -0.98
USH1C-208ENST00000529563 RNF125Q96EQ8 232 aa8.9□□□□□ -0.98
USH1C-208ENST00000529563 TMEM147Q9BVK8 224 aa8.9□□□□□ -0.98
USH1C-208ENST00000529563 OR5AC2Q9NZP5 309 aa8.9□□□□□ -0.98
USH1C-208ENST00000529563 C11orf94C9JXX5 98 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 CCNKO75909 580 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 IFNA5P01569 189 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 GIPP09681 153 aaPredicted RBP8.89□□□□□ -0.99
USH1C-208ENST00000529563 ORM2P19652 201 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 CXCL3P19876 107 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 TCTAP57738 103 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 ZNF90Q03938 601 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 IL15RAQ13261 267 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 FAM90A2PQ658T7 463 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 CYP2G1PQ6ZSU1 146 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 ZNF546Q86UE3 836 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 THAP8Q8NA92 274 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 INO80EQ8NBZ0 244 aaPredicted RBP8.89□□□□□ -0.99
USH1C-208ENST00000529563 OR11H7Q8NGC8 314 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 OR1B1Q8NGR6 318 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 MBD2Q9UBB5 411 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 RNF24Q9Y225 148 aa8.89□□□□□ -0.99
USH1C-208ENST00000529563 TRAV2A0A0B4J234 112 aa8.88□□□□□ -0.99
USH1C-208ENST00000529563 UBE2L5PA0A1B0GUS4 154 aa8.88□□□□□ -0.99
USH1C-208ENST00000529563 IGSF23A1L1A6 192 aa8.88□□□□□ -0.99
USH1C-208ENST00000529563 HELTA6NFD8 242 aa8.88□□□□□ -0.99
USH1C-208ENST00000529563 APOHP02749 345 aaPredicted RBP8.88□□□□□ -0.99
USH1C-208ENST00000529563 OR5G3P0C626 314 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms