RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 ZNF701M0R085 212 aaPredicted RBP12.17□□□□□ -0.46
LTBP3-211ENST00000528966 ATG12O94817 140 aa12.17□□□□□ -0.46
LTBP3-211ENST00000528966 MRPS26Q9BYN8 205 aaKnown RBP12.17□□□□□ -0.46
LTBP3-211ENST00000528966 PFDN2Q9UHV9 154 aa12.17□□□□□ -0.46
LTBP3-211ENST00000528966 TIMM8BQ9Y5J9 83 aaPredicted RBP12.17□□□□□ -0.46
LTBP3-211ENST00000528966 TRAV12-2A0A075B6T6 113 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 KRTAP29-1A8MX34 341 aaPredicted RBP12.16□□□□□ -0.46
LTBP3-211ENST00000528966 PGAM2P15259 253 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 HOXA5P20719 270 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 PRSS3P35030 304 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 PIGPP57054 158 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 GABARAPL2P60520 117 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 SP6Q3SY56 376 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 RNASE12Q5GAN4 147 aaKnown RBP12.16□□□□□ -0.46
LTBP3-211ENST00000528966 ETFRF1Q6IPR1 90 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 OR52E5Q8NH55 327 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 RRNAD1Q96FB5 475 aaKnown RBP12.16□□□□□ -0.46
LTBP3-211ENST00000528966 C16orf92Q96LL3 132 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 NOP10Q9NPE3 64 aaKnown RBP12.16□□□□□ -0.46
LTBP3-211ENST00000528966 TNFRSF18Q9Y5U5 241 aa12.16□□□□□ -0.46
LTBP3-211ENST00000528966 A0A087WTM6 91 aa12.15□□□□□ -0.46
LTBP3-211ENST00000528966 A0A087WXM4 84 aa12.15□□□□□ -0.46
LTBP3-211ENST00000528966 C3orf85A0A1B0GTC6 90 aa12.15□□□□□ -0.46
LTBP3-211ENST00000528966 ZNF90Q03938 601 aa12.15□□□□□ -0.46
LTBP3-211ENST00000528966 TRIM16LQ309B1 348 aa12.15□□□□□ -0.46
LTBP3-211ENST00000528966 OR8I2Q8N0Y5 310 aa12.15□□□□□ -0.46
LTBP3-211ENST00000528966 GPX8Q8TED1 209 aa12.15□□□□□ -0.46
LTBP3-211ENST00000528966 LRP1Q07954 4544 aaKnown RBP12.14□□□□□ -0.47
LTBP3-211ENST00000528966 SMIM18P0DKX4 95 aa12.14□□□□□ -0.47
LTBP3-211ENST00000528966 LYZP61626 148 aa12.14□□□□□ -0.47
LTBP3-211ENST00000528966 UBE2NLQ5JXB2 153 aa12.14□□□□□ -0.47
LTBP3-211ENST00000528966 SERTAD4-AS1Q5TG53 156 aa12.14□□□□□ -0.47
LTBP3-211ENST00000528966 SAMD13Q5VXD3 122 aa12.14□□□□□ -0.47
LTBP3-211ENST00000528966 GPR141Q7Z602 305 aa12.14□□□□□ -0.47
LTBP3-211ENST00000528966 RNASE11Q8TAA1 199 aaKnown RBP12.14□□□□□ -0.47
LTBP3-211ENST00000528966 C16orf74Q96GX8 76 aa12.14□□□□□ -0.47
LTBP3-211ENST00000528966 ZNF486Q96H40 463 aaPredicted RBP12.14□□□□□ -0.47
LTBP3-211ENST00000528966 LINC01587Q99440 93 aa12.14□□□□□ -0.47
LTBP3-211ENST00000528966 IGKV1D-37A0A075B6S9 117 aa12.13□□□□□ -0.47
LTBP3-211ENST00000528966 HTN1P15515 57 aa12.13□□□□□ -0.47
LTBP3-211ENST00000528966 UCP1P25874 307 aa12.13□□□□□ -0.47
LTBP3-211ENST00000528966 RCVRNP35243 200 aa12.13□□□□□ -0.47
LTBP3-211ENST00000528966 MEOX2P50222 304 aa12.13□□□□□ -0.47
LTBP3-211ENST00000528966 TAS2R60P59551 318 aa12.13□□□□□ -0.47
LTBP3-211ENST00000528966 SPARTQ8N0X7 666 aa12.13□□□□□ -0.47
LTBP3-211ENST00000528966 LINC00612Q8N6U2 182 aa12.13□□□□□ -0.47
LTBP3-211ENST00000528966 OR10J6PQ8NGY7 276 aa12.13□□□□□ -0.47
LTBP3-211ENST00000528966 RNASE8Q8TDE3 154 aaKnown RBP12.13□□□□□ -0.47
LTBP3-211ENST00000528966 SLC25A39Q9BZJ4 359 aaPredicted RBP12.13□□□□□ -0.47
LTBP3-211ENST00000528966 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.13□□□□□ -0.47
LTBP3-211ENST00000528966 LOC100506127A0A0U1RQW1 187 aa12.12□□□□□ -0.47
LTBP3-211ENST00000528966 H3BNG1 76 aa12.12□□□□□ -0.47
LTBP3-211ENST00000528966 DUSP14O95147 198 aaKnown RBP12.12□□□□□ -0.47
LTBP3-211ENST00000528966 GCSHP23434 173 aa12.12□□□□□ -0.47
LTBP3-211ENST00000528966 KLF9Q13886 244 aaPredicted RBP12.12□□□□□ -0.47
LTBP3-211ENST00000528966 NMSQ5H8A3 153 aa12.12□□□□□ -0.47
LTBP3-211ENST00000528966 IGFL4Q6B9Z1 124 aa12.12□□□□□ -0.47
LTBP3-211ENST00000528966 ZFP92A6NM28 416 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 BOLA2-SMG1P6H3BVE0 249 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 SIVA1O15304 175 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 TMEM127O75204 238 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 TMEM144Q7Z5S9 345 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 LHFPL1Q86WI0 220 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 TMEM256Q8N2U0 113 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 SAMD12Q8N8I0 201 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 PPP1R14BQ96C90 147 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 SLC25A32Q9H2D1 315 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 CACNG5Q9UF02 275 aa12.11□□□□□ -0.47
LTBP3-211ENST00000528966 A6NHS1 94 aa12.1□□□□□ -0.47
LTBP3-211ENST00000528966 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.1□□□□□ -0.47
LTBP3-211ENST00000528966 FAM219AQ8IW50 185 aa12.1□□□□□ -0.47
LTBP3-211ENST00000528966 RNF182Q8N6D2 247 aa12.1□□□□□ -0.47
LTBP3-211ENST00000528966 SYT8Q8NBV8 401 aa12.1□□□□□ -0.47
LTBP3-211ENST00000528966 LHFPL5Q8TAF8 219 aa12.1□□□□□ -0.47
LTBP3-211ENST00000528966 RSG1Q9BU20 258 aa12.1□□□□□ -0.47
LTBP3-211ENST00000528966 VCX3AQ9NNX9 186 aa12.1□□□□□ -0.47
LTBP3-211ENST00000528966 NDUFA13Q9P0J0 144 aa12.1□□□□□ -0.47
LTBP3-211ENST00000528966 A0A096LPF7 62 aa12.09□□□□□ -0.47
LTBP3-211ENST00000528966 TRAV8-2A0A0B4J237 113 aa12.09□□□□□ -0.47
LTBP3-211ENST00000528966 GALR1P47211 349 aa12.09□□□□□ -0.47
LTBP3-211ENST00000528966 OR2F1Q13607 317 aa12.09□□□□□ -0.47
LTBP3-211ENST00000528966 GAMTQ14353 236 aa12.09□□□□□ -0.47
LTBP3-211ENST00000528966 ZNF493Q6ZR52 646 aa12.09□□□□□ -0.47
LTBP3-211ENST00000528966 ARRDC1Q8N5I2 433 aa12.09□□□□□ -0.47
LTBP3-211ENST00000528966 TMEM263Q8WUH6 116 aaKnown RBP12.09□□□□□ -0.47
LTBP3-211ENST00000528966 SNRPGP15A8MWD9 76 aa12.08□□□□□ -0.48
LTBP3-211ENST00000528966 CDS2O95674 445 aa12.08□□□□□ -0.48
LTBP3-211ENST00000528966 NOXA1Q86UR1 476 aa12.08□□□□□ -0.48
LTBP3-211ENST00000528966 VSIG2Q96IQ7 327 aa12.08□□□□□ -0.48
LTBP3-211ENST00000528966 TMEM70Q9BUB7 260 aa12.08□□□□□ -0.48
LTBP3-211ENST00000528966 SLC25A22Q9H936 323 aa12.08□□□□□ -0.48
LTBP3-211ENST00000528966 COPZ2Q9P299 210 aa12.08□□□□□ -0.48
LTBP3-211ENST00000528966 SMIM31A0A1B0GVY4 71 aa12.07□□□□□ -0.48
LTBP3-211ENST00000528966 GAGE12BA1L429 117 aa12.07□□□□□ -0.48
LTBP3-211ENST00000528966 GAGE7O76087 117 aa12.07□□□□□ -0.48
LTBP3-211ENST00000528966 GAGE12FP0CL80 117 aa12.07□□□□□ -0.48
LTBP3-211ENST00000528966 GAGE12GP0CL81 117 aa12.07□□□□□ -0.48
LTBP3-211ENST00000528966 GAGE12IP0CL82 117 aa12.07□□□□□ -0.48
LTBP3-211ENST00000528966 ZNF182P17025 639 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms