RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 LYZP61626 148 aa16.67■□□□□ 0.26
CPSF1-202ENST00000527827 MRPS10P82664 201 aaKnown RBP16.67■□□□□ 0.26
CPSF1-202ENST00000527827 SMIM4Q8WVI0 70 aa16.67■□□□□ 0.26
CPSF1-202ENST00000527827 HSPG2P98160 4391 aa16.66■□□□□ 0.26
CPSF1-202ENST00000527827 AKAIN1P0CW23 69 aa16.66■□□□□ 0.26
CPSF1-202ENST00000527827 GPX4P36969 197 aaPredicted RBP16.66■□□□□ 0.26
CPSF1-202ENST00000527827 CCR6P51684 374 aa16.66■□□□□ 0.26
CPSF1-202ENST00000527827 SMCO1Q147U7 214 aa16.66■□□□□ 0.26
CPSF1-202ENST00000527827 EBLN2Q6P2I7 272 aa16.66■□□□□ 0.26
CPSF1-202ENST00000527827 SLC35E1Q96K37 410 aa16.66■□□□□ 0.26
CPSF1-202ENST00000527827 C20orf173Q96LM9 149 aa16.66■□□□□ 0.26
CPSF1-202ENST00000527827 C7orf50Q9BRJ6 194 aaKnown RBP16.66■□□□□ 0.26
CPSF1-202ENST00000527827 OR2F1Q13607 317 aa16.65■□□□□ 0.26
CPSF1-202ENST00000527827 RRN3P1Q2M238 152 aa16.65■□□□□ 0.26
CPSF1-202ENST00000527827 LYZL2Q7Z4W2 148 aa16.65■□□□□ 0.26
CPSF1-202ENST00000527827 OR51S1Q8NGJ8 323 aa16.65■□□□□ 0.26
CPSF1-202ENST00000527827 PRRT1Q99946 306 aa16.65■□□□□ 0.26
CPSF1-202ENST00000527827 KCNIP3Q9Y2W7 256 aa16.65■□□□□ 0.26
CPSF1-202ENST00000527827 A0A0B4J2A0 478 aa16.64■□□□□ 0.25
CPSF1-202ENST00000527827 A8MTW9 85 aa16.64■□□□□ 0.25
CPSF1-202ENST00000527827 SNRPGP15A8MWD9 76 aa16.64■□□□□ 0.25
CPSF1-202ENST00000527827 CTDSP2O14595 271 aa16.64■□□□□ 0.25
CPSF1-202ENST00000527827 RGS5O15539 181 aa16.64■□□□□ 0.25
CPSF1-202ENST00000527827 ATP5IP56385 69 aaPredicted RBP16.64■□□□□ 0.25
CPSF1-202ENST00000527827 DAD1P61803 113 aa16.64■□□□□ 0.25
CPSF1-202ENST00000527827 AMTNQ6UX39 209 aa16.64■□□□□ 0.25
CPSF1-202ENST00000527827 OR8I2Q8N0Y5 310 aa16.64■□□□□ 0.25
CPSF1-202ENST00000527827 C17orf77Q96MU5 243 aa16.64■□□□□ 0.25
CPSF1-202ENST00000527827 SHPKQ9UHJ6 478 aa16.64■□□□□ 0.25
CPSF1-202ENST00000527827 CLVS1Q8IUQ0 354 aaPredicted RBP16.63■□□□□ 0.25
CPSF1-202ENST00000527827 TRGV9Q99603 122 aa16.63■□□□□ 0.25
CPSF1-202ENST00000527827 MAGT1Q9H0U3 335 aa16.63■□□□□ 0.25
CPSF1-202ENST00000527827 RPRMQ9NS64 109 aa16.63■□□□□ 0.25
CPSF1-202ENST00000527827 IGKV1OR2-108A0A075B7D4 117 aa16.62■□□□□ 0.25
CPSF1-202ENST00000527827 FABP1P07148 127 aa16.62■□□□□ 0.25
CPSF1-202ENST00000527827 PPP1R14BQ96C90 147 aa16.62■□□□□ 0.25
CPSF1-202ENST00000527827 IGF2BP2-AS1Q96M15 143 aa16.62■□□□□ 0.25
CPSF1-202ENST00000527827 DOK5Q9P104 306 aa16.62■□□□□ 0.25
CPSF1-202ENST00000527827 CTDSPLO15194 276 aa16.61■□□□□ 0.25
CPSF1-202ENST00000527827 FAM3BP58499 235 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-202ENST00000527827 C15orf53Q8NAA6 179 aa16.61■□□□□ 0.25
CPSF1-202ENST00000527827 C16orf92Q96LL3 132 aa16.61■□□□□ 0.25
CPSF1-202ENST00000527827 PRM2P04554 102 aa16.6■□□□□ 0.25
CPSF1-202ENST00000527827 SMIM18P0DKX4 95 aa16.6■□□□□ 0.25
CPSF1-202ENST00000527827 TNP2Q05952 138 aa16.6■□□□□ 0.25
CPSF1-202ENST00000527827 SAMD13Q5VXD3 122 aa16.6■□□□□ 0.25
CPSF1-202ENST00000527827 THAP8Q8NA92 274 aa16.6■□□□□ 0.25
CPSF1-202ENST00000527827 OR1S1Q8NH92 325 aa16.6■□□□□ 0.25
CPSF1-202ENST00000527827 SLC25A32Q9H2D1 315 aa16.6■□□□□ 0.25
CPSF1-202ENST00000527827 TMED3Q9Y3Q3 217 aa16.6■□□□□ 0.25
CPSF1-202ENST00000527827 ANKRD20A5PA0PJZ0 165 aa16.59■□□□□ 0.25
CPSF1-202ENST00000527827 AKR1C4P17516 323 aa16.59■□□□□ 0.25
CPSF1-202ENST00000527827 ALDH3B2P48448 385 aa16.59■□□□□ 0.25
CPSF1-202ENST00000527827 MEOX2P50222 304 aa16.59■□□□□ 0.25
CPSF1-202ENST00000527827 TMEM208Q9BTX3 173 aa16.59■□□□□ 0.25
CPSF1-202ENST00000527827 PITX3O75364 302 aa16.58■□□□□ 0.24
CPSF1-202ENST00000527827 IL18Q14116 193 aa16.58■□□□□ 0.24
CPSF1-202ENST00000527827 SCGB3A2Q96PL1 93 aa16.58■□□□□ 0.24
CPSF1-202ENST00000527827 RSG1Q9BU20 258 aa16.58■□□□□ 0.24
CPSF1-202ENST00000527827 SCP2D1Q9UJQ7 156 aa16.58■□□□□ 0.24
CPSF1-202ENST00000527827 ZNF705GA8MUZ8 300 aaPredicted RBP16.57■□□□□ 0.24
CPSF1-202ENST00000527827 CRXO43186 299 aaPredicted RBP16.57■□□□□ 0.24
CPSF1-202ENST00000527827 GALR1P47211 349 aa16.57■□□□□ 0.24
CPSF1-202ENST00000527827 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.57■□□□□ 0.24
CPSF1-202ENST00000527827 OR11H7Q8NGC8 314 aa16.57■□□□□ 0.24
CPSF1-202ENST00000527827 SLC25A22Q9H936 323 aa16.57■□□□□ 0.24
CPSF1-202ENST00000527827 LRP1BQ9NZR2 4599 aa16.56■□□□□ 0.24
CPSF1-202ENST00000527827 ZNF98A6NK75 572 aa16.56■□□□□ 0.24
CPSF1-202ENST00000527827 LYRM9A8MSI8 78 aa16.56■□□□□ 0.24
CPSF1-202ENST00000527827 IAPPP10997 89 aa16.56■□□□□ 0.24
CPSF1-202ENST00000527827 SRPXP78539 464 aa16.56■□□□□ 0.24
CPSF1-202ENST00000527827 SPCS2Q15005 226 aa16.56■□□□□ 0.24
CPSF1-202ENST00000527827 SPINK13Q1W4C9 94 aa16.56■□□□□ 0.24
CPSF1-202ENST00000527827 DIRAS2Q96HU8 199 aa16.56■□□□□ 0.24
CPSF1-202ENST00000527827 ATG101Q9BSB4 218 aa16.56■□□□□ 0.24
CPSF1-202ENST00000527827 NBDYA0A0U1RRE5 68 aa16.55■□□□□ 0.24
CPSF1-202ENST00000527827 C16orf90A8MZG2 172 aa16.55■□□□□ 0.24
CPSF1-202ENST00000527827 M0R2Z0 102 aa16.55■□□□□ 0.24
CPSF1-202ENST00000527827 CNN1P51911 297 aaKnown RBP16.55■□□□□ 0.24
CPSF1-202ENST00000527827 RAB11AP62491 216 aa16.55■□□□□ 0.24
CPSF1-202ENST00000527827 GGNBP1Q5YKI7 109 aa16.55■□□□□ 0.24
CPSF1-202ENST00000527827 ZNRF2Q8NHG8 242 aa16.55■□□□□ 0.24
CPSF1-202ENST00000527827 SLC45A2Q9UMX9 530 aa16.55■□□□□ 0.24
CPSF1-202ENST00000527827 PLAC8L1A1L4L8 177 aa16.54■□□□□ 0.24
CPSF1-202ENST00000527827 PRSS46E5RG02 174 aa16.54■□□□□ 0.24
CPSF1-202ENST00000527827 CDK2AP2O75956 126 aa16.54■□□□□ 0.24
CPSF1-202ENST00000527827 CFDP00746 253 aaPredicted RBP16.54■□□□□ 0.24
CPSF1-202ENST00000527827 INSP01308 110 aa16.54■□□□□ 0.24
CPSF1-202ENST00000527827 IGFL4Q6B9Z1 124 aa16.54■□□□□ 0.24
CPSF1-202ENST00000527827 TMEM182Q6ZP80 229 aaPredicted RBP16.54■□□□□ 0.24
CPSF1-202ENST00000527827 MCUBQ9NWR8 336 aa16.54■□□□□ 0.24
CPSF1-202ENST00000527827 RABL2AQ9UBK7 228 aaPredicted RBP16.54■□□□□ 0.24
CPSF1-202ENST00000527827 PAIP2BQ9ULR5 123 aaKnown RBP16.54■□□□□ 0.24
CPSF1-202ENST00000527827 RABL2BQ9UNT1 228 aa16.54■□□□□ 0.24
CPSF1-202ENST00000527827 TRAV8-2A0A0B4J237 113 aa16.53■□□□□ 0.24
CPSF1-202ENST00000527827 DUSP14O95147 198 aaKnown RBP16.53■□□□□ 0.24
CPSF1-202ENST00000527827 DEFB130BP0DP73 79 aa16.53■□□□□ 0.24
CPSF1-202ENST00000527827 DEFB130AP0DP74 79 aa16.53■□□□□ 0.24
CPSF1-202ENST00000527827 ANXA3P12429 323 aa16.53■□□□□ 0.24
CPSF1-202ENST00000527827 C6orf223Q8N319 242 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms