RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 ZNF688P0C7X2 276 aa12.43□□□□□ -0.42
NR1H3-229ENST00000527464 SNRPD3P62318 126 aaKnown RBP12.43□□□□□ -0.42
NR1H3-229ENST00000527464 SELENOTP62341 195 aa12.43□□□□□ -0.42
NR1H3-229ENST00000527464 CASC10Q5T4H9 136 aa12.43□□□□□ -0.42
NR1H3-229ENST00000527464 PPP1R14BQ96C90 147 aa12.43□□□□□ -0.42
NR1H3-229ENST00000527464 NPVFQ9HCQ7 196 aa12.43□□□□□ -0.42
NR1H3-229ENST00000527464 MGAT4CQ9UBM8 478 aa12.43□□□□□ -0.42
NR1H3-229ENST00000527464 KMT2CQ8NEZ4 4911 aaKnown RBP12.43□□□□□ -0.42
NR1H3-229ENST00000527464 DEDDO75618 318 aa12.42□□□□□ -0.42
NR1H3-229ENST00000527464 PVALBP20472 110 aaPredicted RBP12.42□□□□□ -0.42
NR1H3-229ENST00000527464 IL15RAQ13261 267 aa12.42□□□□□ -0.42
NR1H3-229ENST00000527464 DEFB135Q30KP9 77 aa12.42□□□□□ -0.42
NR1H3-229ENST00000527464 LEMD1Q68G75 181 aa12.42□□□□□ -0.42
NR1H3-229ENST00000527464 NRARPQ7Z6K4 114 aa12.42□□□□□ -0.42
NR1H3-229ENST00000527464 STHQ8IWL8 128 aa12.42□□□□□ -0.42
NR1H3-229ENST00000527464 LSM5Q9Y4Y9 91 aaKnown RBP12.42□□□□□ -0.42
NR1H3-229ENST00000527464 INMT-MINDY4F8WBC2 141 aa12.41□□□□□ -0.42
NR1H3-229ENST00000527464 CCNKO75909 580 aa12.41□□□□□ -0.42
NR1H3-229ENST00000527464 SAMD13Q5VXD3 122 aa12.41□□□□□ -0.42
NR1H3-229ENST00000527464 CYP2G1PQ6ZSU1 146 aa12.41□□□□□ -0.42
NR1H3-229ENST00000527464 OR8I2Q8N0Y5 310 aa12.41□□□□□ -0.42
NR1H3-229ENST00000527464 GATAD1Q8WUU5 269 aa12.41□□□□□ -0.42
NR1H3-229ENST00000527464 MARVELD1Q9BSK0 173 aa12.41□□□□□ -0.42
NR1H3-229ENST00000527464 C11orf1Q9H5F2 150 aa12.41□□□□□ -0.42
NR1H3-229ENST00000527464 TENM2Q9NT68 2774 aa12.41□□□□□ -0.42
NR1H3-229ENST00000527464 PLP1P60201 277 aa12.4□□□□□ -0.42
NR1H3-229ENST00000527464 RRAS2P62070 204 aaPredicted RBP12.4□□□□□ -0.42
NR1H3-229ENST00000527464 TMEM41BQ5BJD5 291 aa12.4□□□□□ -0.42
NR1H3-229ENST00000527464 MORN3Q6PF18 240 aaPredicted RBP12.4□□□□□ -0.42
NR1H3-229ENST00000527464 TEPPQ6URK8 271 aa12.4□□□□□ -0.42
NR1H3-229ENST00000527464 S100A7AQ86SG5 101 aa12.4□□□□□ -0.42
NR1H3-229ENST00000527464 GPR82Q96P67 336 aa12.4□□□□□ -0.42
NR1H3-229ENST00000527464 TMEM147Q9BVK8 224 aa12.4□□□□□ -0.42
NR1H3-229ENST00000527464 ZNF98A6NK75 572 aa12.39□□□□□ -0.43
NR1H3-229ENST00000527464 SPP1P10451 314 aa12.39□□□□□ -0.43
NR1H3-229ENST00000527464 ORM2P19652 201 aa12.39□□□□□ -0.43
NR1H3-229ENST00000527464 GATA2P23769 480 aaPredicted RBP12.39□□□□□ -0.43
NR1H3-229ENST00000527464 ID1P41134 155 aa12.39□□□□□ -0.43
NR1H3-229ENST00000527464 MEOX2P50222 304 aa12.39□□□□□ -0.43
NR1H3-229ENST00000527464 BCAP31P51572 246 aa12.39□□□□□ -0.43
NR1H3-229ENST00000527464 CAV2P51636 162 aa12.39□□□□□ -0.43
NR1H3-229ENST00000527464 PSMG4Q5JS54 123 aa12.39□□□□□ -0.43
NR1H3-229ENST00000527464 TMEM182Q6ZP80 229 aaPredicted RBP12.39□□□□□ -0.43
NR1H3-229ENST00000527464 TRPT1Q86TN4 253 aaKnown RBP12.39□□□□□ -0.43
NR1H3-229ENST00000527464 HYPMO75409 117 aa12.38□□□□□ -0.43
NR1H3-229ENST00000527464 ATF4P18848 351 aaPredicted RBP12.38□□□□□ -0.43
NR1H3-229ENST00000527464 GALR1P47211 349 aa12.38□□□□□ -0.43
NR1H3-229ENST00000527464 S100A10P60903 97 aa12.38□□□□□ -0.43
NR1H3-229ENST00000527464 RAP2BP61225 183 aa12.38□□□□□ -0.43
NR1H3-229ENST00000527464 ARL16Q0P5N6 197 aa12.38□□□□□ -0.43
NR1H3-229ENST00000527464 PXDC1Q5TGL8 231 aa12.38□□□□□ -0.43
NR1H3-229ENST00000527464 OR1B1Q8NGR6 318 aa12.38□□□□□ -0.43
NR1H3-229ENST00000527464 LYRM2Q9NU23 88 aaPredicted RBP12.38□□□□□ -0.43
NR1H3-229ENST00000527464 RNF24Q9Y225 148 aa12.38□□□□□ -0.43
NR1H3-229ENST00000527464 CSMD3Q7Z407 3707 aa12.38□□□□□ -0.43
NR1H3-229ENST00000527464 KNCNA6PVL3 124 aa12.37□□□□□ -0.43
NR1H3-229ENST00000527464 CA1P00915 261 aaPredicted RBP12.37□□□□□ -0.43
NR1H3-229ENST00000527464 LINC00869P0C866 280 aa12.37□□□□□ -0.43
NR1H3-229ENST00000527464 PSMB3P49720 205 aa12.37□□□□□ -0.43
NR1H3-229ENST00000527464 CYCSP99999 105 aaKnown RBP12.37□□□□□ -0.43
NR1H3-229ENST00000527464 SLC38A11Q08AI6 406 aa12.37□□□□□ -0.43
NR1H3-229ENST00000527464 RAB32Q13637 225 aa12.37□□□□□ -0.43
NR1H3-229ENST00000527464 ACTL10Q5JWF8 245 aa12.37□□□□□ -0.43
NR1H3-229ENST00000527464 ZNF546Q86UE3 836 aa12.37□□□□□ -0.43
NR1H3-229ENST00000527464 HIGD1AQ9Y241 93 aa12.37□□□□□ -0.43
NR1H3-229ENST00000527464 FAM24AA6NFZ4 105 aa12.36□□□□□ -0.43
NR1H3-229ENST00000527464 H3BRN7 92 aa12.36□□□□□ -0.43
NR1H3-229ENST00000527464 ISLRO14498 428 aa12.36□□□□□ -0.43
NR1H3-229ENST00000527464 SOCS3O14543 225 aa12.36□□□□□ -0.43
NR1H3-229ENST00000527464 SULT1A1P50225 295 aa12.36□□□□□ -0.43
NR1H3-229ENST00000527464 TMEM217Q8N7C4 229 aa12.36□□□□□ -0.43
NR1H3-229ENST00000527464 SHANK2-AS3Q9BTD1 123 aa12.36□□□□□ -0.43
NR1H3-229ENST00000527464 SLC25A39Q9BZJ4 359 aaPredicted RBP12.36□□□□□ -0.43
NR1H3-229ENST00000527464 NMES1Q9C002 83 aa12.36□□□□□ -0.43
NR1H3-229ENST00000527464 SLC25A32Q9H2D1 315 aa12.36□□□□□ -0.43
NR1H3-229ENST00000527464 SLC25A22Q9H936 323 aa12.36□□□□□ -0.43
NR1H3-229ENST00000527464 GOSR2O14653 212 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 AGPAT2O15120 278 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 CST7O76096 145 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 RLN2P04090 185 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 S100A11P31949 105 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 HBG1P69891 147 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 HBG2P69892 147 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 RAB31Q13636 194 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 ZFAND6Q6FIF0 208 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 STX12Q86Y82 276 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 TMEM252Q8N6L7 170 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 RARRES2Q99969 163 aa12.35□□□□□ -0.43
NR1H3-229ENST00000527464 A0A0J9YWU9 116 aa12.34□□□□□ -0.43
NR1H3-229ENST00000527464 OR5G3P0C626 314 aa12.34□□□□□ -0.43
NR1H3-229ENST00000527464 HLA-DRB4P13762 266 aa12.34□□□□□ -0.43
NR1H3-229ENST00000527464 RPL7P18124 248 aaKnown RBP12.34□□□□□ -0.43
NR1H3-229ENST00000527464 NUTF2P61970 127 aaKnown RBP12.34□□□□□ -0.43
NR1H3-229ENST00000527464 ATP6V1FQ16864 119 aa12.34□□□□□ -0.43
NR1H3-229ENST00000527464 VWC2Q2TAL6 325 aa12.34□□□□□ -0.43
NR1H3-229ENST00000527464 SPATA31B1PQ5VZV4 182 aa12.34□□□□□ -0.43
NR1H3-229ENST00000527464 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
NR1H3-229ENST00000527464 UQCC1Q9NVA1 299 aa12.34□□□□□ -0.43
NR1H3-229ENST00000527464 DOK5Q9P104 306 aa12.34□□□□□ -0.43
NR1H3-229ENST00000527464 HLA-DRB4X5D2U9 266 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms