RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ORM2P19652 201 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 S100A7P31151 101 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 ADMP35318 185 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 CDX1P47902 265 aaPredicted RBP9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 CDC34P49427 236 aaPredicted RBP9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 FHITP49789 147 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 PLP1P60201 277 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 LYZP61626 148 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 GCSAMLQ5JQS6 135 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 KHDC1LQ5JSQ8 128 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 C10orf113Q5VZT2 155 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 OR1B1Q8NGR6 318 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 PCNPQ8WW12 178 aaKnown RBP9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 OR5B12Q96R08 314 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 PBDC1Q9BVG4 233 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 DOK5Q9P104 306 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 CTXND1A0A1B0GTU2 59 aa9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 WI2-2373I1.2A0A1W2PRP0 233 aa9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 SEC14L6B5MCN3 397 aa9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 PPP5D1E7EU14 171 aa9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 HBE1P02100 147 aa9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 IL4P05112 153 aa9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 FAM78BQ5VT40 261 aa9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 RPP25LQ8N5L8 163 aaKnown RBP9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 SFT2D1Q8WV19 159 aa9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 RNF125Q96EQ8 232 aa9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 RCC1LQ96I51 464 aaKnown RBP9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 MRPL32Q9BYC8 188 aaKnown RBP9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 HIGD1AQ9Y241 93 aa9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 PUS1Q9Y606 427 aaKnown RBP eCLIP9.74□□□□□ -0.85
SSSCA1-203ENST00000526877 BMPR1BO00238 502 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 TRBV12-3P01733 135 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 TAS2R45P59539 299 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 PATE2Q6UY27 113 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 MBD3L1Q8WWY6 194 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 TMEM37Q8WXS4 190 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 RAB24Q969Q5 203 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 HRH4Q9H3N8 390 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 SLC25A22Q9H936 323 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 PFDN2Q9UHV9 154 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 RNF24Q9Y225 148 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 FUT9Q9Y231 359 aa9.73□□□□□ -0.85
SSSCA1-203ENST00000526877 IGHV3-35A0A0C4DH35 117 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 MAP1LC3B2A6NCE7 125 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 NUDT19A8MXV4 375 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 NDUFA4O00483 81 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 HSPB1P04792 205 aaKnown RBP9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 IGLL1P15814 213 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 ZNF726P1Q15940 193 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 FAM106AQ4KMX7 169 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 LCN15Q6UWW0 184 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 TOMM20LQ6UXN7 152 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 LINC00305Q7Z4B0 112 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 C4orf3Q8WVX3 66 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 MAP1LC3BQ9GZQ8 125 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 SEPSECSQ9HD40 501 aaKnown RBP9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 TECRQ9NZ01 308 aaKnown RBP9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 MRPL27Q9P0M9 148 aaKnown RBP9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 RABAC1Q9UI14 185 aa9.72□□□□□ -0.85
SSSCA1-203ENST00000526877 TRAV1-1A0A0B4J248 108 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 I3L521 148 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 C8orf88P0DMB2 117 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 CD33P20138 364 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 NDUFA5Q16718 116 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 RPEL1Q2QD12 228 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 SPATA31B1PQ5VZV4 182 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 C18orf65Q6ZTR6 163 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 MIR17HGQ75NE6 70 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 KLHL30-AS1Q8NEE0 82 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 DPF1Q92782 380 aa9.71□□□□□ -0.86
SSSCA1-203ENST00000526877 A0A1B0GV50 99 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 HMGB3O15347 200 aaKnown RBP9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 CXorf1O96002 111 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 ZP3P21754 424 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 USF2Q15853 346 aaPredicted RBP9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 KHDC3LQ587J8 217 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 SSX7Q7RTT5 188 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 REC114Q7Z4M0 266 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 GPHB5Q86YW7 130 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 LINC00482Q8N8I6 264 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 LYPD6BQ8NI32 183 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 NARS2Q96I59 477 aaKnown RBP9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 UHRF2Q96PU4 802 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 METTL26Q96S19 204 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 C20orf24Q9BUV8 137 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 SLC25A39Q9BZJ4 359 aaPredicted RBP9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
SSSCA1-203ENST00000526877 IGHV4OR15-8A0A075B7B6 117 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 A0A087WW49 117 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 ZNF320A2RRD8 509 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 LINC00862A6NCI5 91 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 LINC01619G3V211 115 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 PF4P02776 101 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 STAG3L2P0CL84 134 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 STAG3L3P0CL85 134 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 NPPCP23582 126 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 FGF8P55075 233 aaPredicted RBP9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 PQLC2Q6ZP29 291 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 IQCF2Q8IXL9 164 aa9.69□□□□□ -0.86
SSSCA1-203ENST00000526877 STXBP6Q8NFX7 210 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms