RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 ATOH7Q8N100 152 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 RNASE8Q8TDE3 154 aaKnown RBP9.3□□□□□ -0.92
LINC01001-201ENST00000526704 FMC1Q96HJ9 113 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 PRSS22Q9GZN4 317 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 UQCR10Q9UDW1 63 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 SIGLEC9Q9Y336 463 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 ZZEF1O43149 2961 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 IGHV2-26A0A0B4J1V2 119 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 C19orf71A6NCJ1 209 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 TEX22C9J3V5 150 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 HSBP1O75506 76 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 PLP1P60201 277 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 PAX2Q02962 417 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 MAJINQ3KP22 176 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 EBLN2Q6P2I7 272 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 RNASEKQ6P5S7 137 aaKnown RBP9.3□□□□□ -0.92
LINC01001-201ENST00000526704 GTSF1Q8WW33 167 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 URB1-AS1Q96HZ7 61 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 Q9H3A6 140 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 ZNF492Q9P255 531 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 ABCA1O95477 2261 aa9.3□□□□□ -0.92
LINC01001-201ENST00000526704 M0R2Z0 102 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 IGLV1-47P01700 117 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 TCRAP04437 139 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 CDKN1BP46527 198 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 MMDQ15546 238 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 Q8NA96 180 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 ORAOV1Q8WV07 137 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 F11RQ9Y624 299 aaKnown RBP9.29□□□□□ -0.92
LINC01001-201ENST00000526704 PIEZO2Q9H5I5 2752 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 PTTG1IPP53801 180 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 HBBP68871 147 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 CT83Q5H943 113 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 OR8B3Q8NGG8 313 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 OR2D3Q8NGH3 330 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 C8orf46Q8TAG6 207 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 TNFRSF14Q92956 283 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 OR8B2Q96RD0 313 aa9.29□□□□□ -0.92
LINC01001-201ENST00000526704 IGHV1-3A0A0C4DH29 117 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 IGHV1-69-2A0A0G2JMI3 117 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 C2orf70A6NJV1 201 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 GFRALQ6UXV0 394 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 ABHD17AQ96GS6 310 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 K7EP13 123 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 P01737 135 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 FAM120AOSQ5T036 256 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 Q6ZN92 141 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 Q71RC1 249 aaPredicted RBP9.28□□□□□ -0.92
LINC01001-201ENST00000526704 SSX8Q7RTT4 187 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 SPATA12Q7Z6I5 190 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 Q86TA4 180 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 KIR3DL3Q8N743 410 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 KLHDC1Q8N7A1 406 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 TXN2Q99757 166 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 HIGD1AQ9Y241 93 aa9.28□□□□□ -0.92
LINC01001-201ENST00000526704 VSTM5A8MXK1 200 aa9.27□□□□□ -0.92
LINC01001-201ENST00000526704 CCL25O15444 150 aa9.27□□□□□ -0.92
LINC01001-201ENST00000526704 NDUFB8O95169 186 aa9.27□□□□□ -0.92
LINC01001-201ENST00000526704 IGLC1P0CG04 106 aa9.27□□□□□ -0.92
LINC01001-201ENST00000526704 CD24P25063 80 aa9.27□□□□□ -0.92
LINC01001-201ENST00000526704 HNRNPA3P51991 378 aaKnown RBP9.27□□□□□ -0.92
LINC01001-201ENST00000526704 LYZP61626 148 aa9.27□□□□□ -0.92
LINC01001-201ENST00000526704 PMCHL1Q16048 86 aa9.27□□□□□ -0.92
LINC01001-201ENST00000526704 PPP1R27Q86WC6 154 aa9.27□□□□□ -0.92
LINC01001-201ENST00000526704 PGLYRP4Q96LB8 373 aa9.27□□□□□ -0.92
LINC01001-201ENST00000526704 GVINP1Q7Z2Y8 2422 aa9.27□□□□□ -0.93
LINC01001-201ENST00000526704 RIF1Q5UIP0 2472 aaKnown RBP9.27□□□□□ -0.93
LINC01001-201ENST00000526704 A8MWL6 223 aa9.27□□□□□ -0.93
LINC01001-201ENST00000526704 BUB1B-PAK6H3BSN5 160 aa9.27□□□□□ -0.93
LINC01001-201ENST00000526704 PSG1P11464 419 aa9.27□□□□□ -0.93
LINC01001-201ENST00000526704 ZNF835Q9Y2P0 537 aa9.27□□□□□ -0.93
LINC01001-201ENST00000526704 TRAV8-1A0A0A6YYK1 113 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 SH2D7A6NKC9 451 aaPredicted RBP9.26□□□□□ -0.93
LINC01001-201ENST00000526704 M0QZ24 198 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 Q56UQ5 140 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 STPG4Q8N801 248 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 GFRA4Q9GZZ7 299 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 FBXL15Q9H469 300 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 CLEC5AQ9NY25 188 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 RALYQ9UKM9 306 aaKnown RBP9.26□□□□□ -0.93
LINC01001-201ENST00000526704 INSIG2Q9Y5U4 225 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 SOX21Q9Y651 276 aaPredicted RBP9.26□□□□□ -0.93
LINC01001-201ENST00000526704 NPIPB6E9PJ23 425 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 LYNX1G3V0Z9 82 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 I3L2K1 104 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 TACC2O95359 2948 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 IGLV2-11P01706 119 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 LYNX1P0DP58 116 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 HOXB4P17483 251 aaPredicted RBP9.26□□□□□ -0.93
LINC01001-201ENST00000526704 PRR30Q53SZ7 412 aaPredicted RBP9.26□□□□□ -0.93
LINC01001-201ENST00000526704 SRSF12Q8WXF0 261 aaKnown RBP9.26□□□□□ -0.93
LINC01001-201ENST00000526704 SLC25A39Q9BZJ4 359 aaPredicted RBP9.26□□□□□ -0.93
LINC01001-201ENST00000526704 TMEM14CQ9P0S9 112 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 LAMTOR2Q9Y2Q5 125 aa9.26□□□□□ -0.93
LINC01001-201ENST00000526704 TRAV9-2A0A087WT02 112 aa9.25□□□□□ -0.93
LINC01001-201ENST00000526704 COX7A1P24310 79 aa9.25□□□□□ -0.93
LINC01001-201ENST00000526704 FOXA3P55318 350 aaPredicted RBP9.25□□□□□ -0.93
LINC01001-201ENST00000526704 RBPMS2Q6ZRY4 209 aaKnown RBP9.25□□□□□ -0.93
LINC01001-201ENST00000526704 EXOC3-AS1Q8N2X6 119 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms