RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SMIM6P0DI80 62 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 MPC1LP0DKB6 136 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SMIM10L2AP0DMW4 78 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SMIM10L2BP0DMW5 78 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 PIPP12273 146 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 IL7P13232 177 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 HRES1P13985 223 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 RPS3P23396 243 aaKnown RBP eCLIP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 CRYBB3P26998 211 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 PEBP1P30086 187 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF93P35789 620 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 GNG4P50150 75 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 POLR2HP52434 150 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 LINC00313P59037 77 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TSPEAR-AS2P59090 65 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 DNAJB13P59910 316 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SNRPD3P62318 126 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SELENOWP63302 87 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 CATR1Q13166 79 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 KLRD1Q13241 179 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 CDK5R1Q15078 307 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 OR8G1Q15617 311 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 RRN3P1Q2M238 152 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 MRPL51Q4U2R6 128 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 C10orf91Q5T1B1 145 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM78Q5T7P6 136 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 HCP5Q6MZN7 132 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TOMM20LQ6UXN7 152 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 ALKAL1Q6UXT8 129 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 IZUMO2Q6UXV1 221 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 IDO2Q6ZQW0 420 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SPATA12Q7Z6I5 190 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 KTN1-AS1Q86SY8 53 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 LHFPL1Q86WI0 220 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 PHF13Q86YI8 300 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SNX29P2Q8IUI4 249 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 FAM216BQ8N7L0 139 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SIGLECL1Q8N7X8 197 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 CNEP1R1Q8N9A8 125 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SPTSSBQ8NFR3 76 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 OR52R1Q8NGF1 315 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 OR10D4PQ8NGN7 298 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM254Q8TBM7 123 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 WFDC5Q8TCV5 224 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 AQP3Q92482 292 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 PSMF1Q92530 271 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SPTSSAQ969W0 71 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 ADAT3Q96EY9 351 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 PPP3R2Q96LZ3 170 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 OR8B2Q96RD0 313 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 GPX7Q96SL4 187 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SMIM7Q9BQ49 75 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 VAMP8Q9BV40 100 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SEC11CQ9BY50 192 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 MRPL32Q9BYC8 188 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 LINC00470Q9BZP3 86 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 NKX6-2Q9C056 277 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 AICDAQ9GZX7 198 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 ATG5Q9H1Y0 275 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 LRTM1Q9HBL6 345 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 JPT1Q9UK76 154 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 HS3ST2Q9Y278 367 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 NOP16Q9Y3C1 178 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 HEY1Q9Y5J3 304 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 LY96Q9Y6Y9 160 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 MINOS1-NBL1R4GNA1 71 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 HSPE1-MOB4S4R3N1 261 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 RFX7Q2KHR2 1363 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 ABCC12Q96J65 1359 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 MAP3K5Q99683 1374 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 RPRD2Q5VT52 1461 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 DSPPQ9NZW4 1301 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 PCF11O94913 1555 aaKnown RBP0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 TECPR2O15040 1411 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 PLCH2O75038 1416 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 NOS1P29475 1434 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 PTPRKQ15262 1439 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 NCOA1Q15788 1441 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV23DV6A0A075B6W5 121 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 IGKV1OR2-108A0A075B7D4 117 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 UQCRHLA0A096LP55 91 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 IGHV1-24A0A0C4DH33 117 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 IGKV1-12A0A0C4DH73 117 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A0D9SG52 128 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A0J9YX75 114 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A1B0GU33 70 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 FAM236AA0A1B0GUQ0 79 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 FAM236BA0A1B0GV22 79 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A1B0GVG6 124 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A1B0GW54 56 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A1W2PQD3 144 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 TCRBV3S1A0A5B6 114 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 ARRDC5A6NEK1 342 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM212A6NML5 194 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 A8MWP4 228 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 C9JCJ5 164 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 H7C2G1 150 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 APOC4-APOC2K7ER74 178 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 NPFFO15130 113 aa0.66□□□□□ -2.3
ECHDC1-219ENST00000526299 KLF7O75840 302 aaPredicted RBP0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms