RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 YIF1AO95070 293 aa13.1□□□□□ -0.31
CCS-204ENST00000526066 LINC00869P0C866 280 aa13.1□□□□□ -0.31
CCS-204ENST00000526066 NKX2-5P52952 324 aaPredicted RBP13.1□□□□□ -0.31
CCS-204ENST00000526066 EIF5AP63241 154 aaKnown RBP13.1□□□□□ -0.31
CCS-204ENST00000526066 PXDC1Q5TGL8 231 aa13.1□□□□□ -0.31
CCS-204ENST00000526066 GINS3Q9BRX5 216 aa13.1□□□□□ -0.31
CCS-204ENST00000526066 UFC1Q9Y3C8 167 aa13.1□□□□□ -0.31
CCS-204ENST00000526066 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 OVOL1O14753 267 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 IL4P05112 153 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 GATA2P23769 480 aaPredicted RBP13.09□□□□□ -0.31
CCS-204ENST00000526066 MIC13Q5XKP0 118 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 STPG3Q8N7X2 389 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 OR9G4Q8NGQ1 327 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 GNPNAT1Q96EK6 184 aaPredicted RBP13.09□□□□□ -0.31
CCS-204ENST00000526066 RNF125Q96EQ8 232 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 PSMG3Q9BT73 122 aaPredicted RBP13.09□□□□□ -0.31
CCS-204ENST00000526066 RSG1Q9BU20 258 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 ZNF471Q9BX82 626 aaPredicted RBP13.09□□□□□ -0.31
CCS-204ENST00000526066 ZMAT4Q9H898 229 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 DAZ1Q9NQZ3 744 aaKnown RBP13.09□□□□□ -0.31
CCS-204ENST00000526066 PEMTQ9UBM1 199 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 PXMP4Q9Y6I8 212 aa13.09□□□□□ -0.31
CCS-204ENST00000526066 HNRNPCP07910 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCS-204ENST00000526066 ATP6V0CP27449 155 aa13.08□□□□□ -0.32
CCS-204ENST00000526066 LYZP61626 148 aa13.08□□□□□ -0.32
CCS-204ENST00000526066 B2MP61769 119 aa13.08□□□□□ -0.32
CCS-204ENST00000526066 Q6ZRG5 221 aa13.08□□□□□ -0.32
CCS-204ENST00000526066 HSD17B11Q8NBQ5 300 aa13.08□□□□□ -0.32
CCS-204ENST00000526066 STOML3Q8TAV4 291 aa13.08□□□□□ -0.32
CCS-204ENST00000526066 C20orf24Q9BUV8 137 aa13.08□□□□□ -0.32
CCS-204ENST00000526066 SLC39A9Q9NUM3 307 aa13.08□□□□□ -0.32
CCS-204ENST00000526066 TMEM213A2RRL7 107 aa13.07□□□□□ -0.32
CCS-204ENST00000526066 USF2Q15853 346 aaPredicted RBP13.07□□□□□ -0.32
CCS-204ENST00000526066 SLC51BQ86UW2 128 aa13.07□□□□□ -0.32
CCS-204ENST00000526066 OR2G3Q8NGZ4 309 aa13.07□□□□□ -0.32
CCS-204ENST00000526066 MARC2Q969Z3 335 aa13.07□□□□□ -0.32
CCS-204ENST00000526066 METTL26Q96S19 204 aa13.07□□□□□ -0.32
CCS-204ENST00000526066 TPT1P13693 172 aaKnown RBP13.06□□□□□ -0.32
CCS-204ENST00000526066 CRYBB3P26998 211 aa13.06□□□□□ -0.32
CCS-204ENST00000526066 SERF2P84101 59 aa13.06□□□□□ -0.32
CCS-204ENST00000526066 PBDC1Q9BVG4 233 aa13.06□□□□□ -0.32
CCS-204ENST00000526066 SIGLEC8Q9NYZ4 499 aa13.06□□□□□ -0.32
CCS-204ENST00000526066 MRPL27Q9P0M9 148 aaKnown RBP13.06□□□□□ -0.32
CCS-204ENST00000526066 PFDN2Q9UHV9 154 aa13.06□□□□□ -0.32
CCS-204ENST00000526066 IGHV3OR16-8A0A075B7F1 116 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 ELOA3CA0A087WX78 387 aaPredicted RBP13.05□□□□□ -0.32
CCS-204ENST00000526066 C2orf70A6NJV1 201 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 HYPMO75409 117 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 C8orf88P0DMB2 117 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 ORM2P19652 201 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 NPPCP23582 126 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 S100A7P31151 101 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 TM4SF20Q53R12 229 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 IL34Q6ZMJ4 242 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 S100A7AQ86SG5 101 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 SBSPONQ8IVN8 264 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 OR1L4Q8NGR5 311 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 OR1B1Q8NGR6 318 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 PFDN5Q99471 154 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 ELOVL1Q9BW60 279 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 RABAC1Q9UI14 185 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 U3KQE9 123 aa13.05□□□□□ -0.32
CCS-204ENST00000526066 SORL1Q92673 2214 aa13.04□□□□□ -0.32
CCS-204ENST00000526066 LCE6AA0A183 80 aa13.04□□□□□ -0.32
CCS-204ENST00000526066 CSN3P07498 182 aa13.04□□□□□ -0.32
CCS-204ENST00000526066 SPP1P10451 314 aa13.04□□□□□ -0.32
CCS-204ENST00000526066 FFAR4Q5NUL3 377 aa13.04□□□□□ -0.32
CCS-204ENST00000526066 GATAD1Q8WUU5 269 aa13.04□□□□□ -0.32
CCS-204ENST00000526066 SH3BGRL3Q9H299 93 aa13.04□□□□□ -0.32
CCS-204ENST00000526066 DNAJC4Q9NNZ3 241 aa13.04□□□□□ -0.32
CCS-204ENST00000526066 HIGD1AQ9Y241 93 aa13.04□□□□□ -0.32
CCS-204ENST00000526066 TENM2Q9NT68 2774 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 A0A1W2PS18 150 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 ZNF207O43670 478 aaKnown RBP13.03□□□□□ -0.32
CCS-204ENST00000526066 COX7A2P2O60397 106 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 OR5G3P0C626 314 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 SEC11BP0C7V7 166 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 CBLN1P23435 193 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 BMI1P35226 326 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 PATE2Q6UY27 113 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 ST8SIA2Q92186 375 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 NARS2Q96I59 477 aaKnown RBP13.03□□□□□ -0.32
CCS-204ENST00000526066 SLC25A32Q9H2D1 315 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 DOK5Q9P104 306 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 SMPXQ9UHP9 88 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 BOLA1Q9Y3E2 137 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 RFNGQ9Y644 331 aa13.03□□□□□ -0.32
CCS-204ENST00000526066 SAP30O75446 220 aa13.02□□□□□ -0.33
CCS-204ENST00000526066 MBP02144 154 aa13.02□□□□□ -0.33
CCS-204ENST00000526066 FOLR2P14207 255 aa13.02□□□□□ -0.33
CCS-204ENST00000526066 ACOT6Q3I5F7 207 aaPredicted RBP13.02□□□□□ -0.33
CCS-204ENST00000526066 C10orf113Q5VZT2 155 aa13.02□□□□□ -0.33
CCS-204ENST00000526066 EIF5AL1Q6IS14 154 aaKnown RBP13.02□□□□□ -0.33
CCS-204ENST00000526066 ADAMTSL5Q6ZMM2 481 aa13.02□□□□□ -0.33
CCS-204ENST00000526066 TMEM37Q8WXS4 190 aa13.02□□□□□ -0.33
CCS-204ENST00000526066 RNF2Q99496 336 aa13.02□□□□□ -0.33
CCS-204ENST00000526066 SLC25A39Q9BZJ4 359 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms