RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 NKX2-1P43699 371 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-210ENST00000525990 ATP5IP56385 69 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-210ENST00000525990 UBE2MP61081 183 aaKnown RBP8.68□□□□□ -1.02
SSBP3-210ENST00000525990 TMEM41BQ5BJD5 291 aa8.68□□□□□ -1.02
SSBP3-210ENST00000525990 SPANXN2Q5MJ10 180 aa8.68□□□□□ -1.02
SSBP3-210ENST00000525990 ACOT7LQ6ZUV0 252 aa8.68□□□□□ -1.02
SSBP3-210ENST00000525990 C2CD4CQ8TF44 421 aa8.68□□□□□ -1.02
SSBP3-210ENST00000525990 PPP1R14BQ96C90 147 aa8.68□□□□□ -1.02
SSBP3-210ENST00000525990 C20orf173Q96LM9 149 aa8.68□□□□□ -1.02
SSBP3-210ENST00000525990 SLC35B3Q9H1N7 401 aa8.68□□□□□ -1.02
SSBP3-210ENST00000525990 SLC25A32Q9H2D1 315 aa8.68□□□□□ -1.02
SSBP3-210ENST00000525990 APLNQ9ULZ1 77 aa8.68□□□□□ -1.02
SSBP3-210ENST00000525990 SNRPGP15A8MWD9 76 aa8.67□□□□□ -1.02
SSBP3-210ENST00000525990 MED6O75586 246 aa8.67□□□□□ -1.02
SSBP3-210ENST00000525990 PRB4P10163 310 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-210ENST00000525990 TRIQKQ629K1 86 aa8.67□□□□□ -1.02
SSBP3-210ENST00000525990 IGFL4Q6B9Z1 124 aa8.67□□□□□ -1.02
SSBP3-210ENST00000525990 ZNF709Q8N972 641 aa8.67□□□□□ -1.02
SSBP3-210ENST00000525990 OR4D5Q8NGN0 318 aa8.67□□□□□ -1.02
SSBP3-210ENST00000525990 DEDD2Q8WXF8 326 aa8.67□□□□□ -1.02
SSBP3-210ENST00000525990 HRH4Q9H3N8 390 aa8.67□□□□□ -1.02
SSBP3-210ENST00000525990 SAV1Q9H4B6 383 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-210ENST00000525990 SLC25A22Q9H936 323 aa8.67□□□□□ -1.02
SSBP3-210ENST00000525990 IGHV3OR16-12A0A075B7B8 117 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 PMS2P5A8MQ11 134 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 ZNF701M0R085 212 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-210ENST00000525990 SSSCA1O60232 199 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 OR4E1P0C645 316 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 ORM2P19652 201 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 INPP1P49441 399 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 PSMB3P49720 205 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 PAX9P55771 341 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 ID3Q02535 119 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 AKR1C1Q04828 323 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 C12orf74Q32Q52 190 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 OR8I2Q8N0Y5 310 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 OR4B1Q8NGF8 309 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 CIB3Q96Q77 187 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-210ENST00000525990 SEPSECSQ9HD40 501 aaKnown RBP8.66□□□□□ -1.02
SSBP3-210ENST00000525990 DOK5Q9P104 306 aa8.66□□□□□ -1.02
SSBP3-210ENST00000525990 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
SSBP3-210ENST00000525990 ZNF98A6NK75 572 aa8.65□□□□□ -1.02
SSBP3-210ENST00000525990 IL7P13232 177 aa8.65□□□□□ -1.02
SSBP3-210ENST00000525990 NUP62P37198 522 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-210ENST00000525990 NUTF2P61970 127 aaKnown RBP8.65□□□□□ -1.02
SSBP3-210ENST00000525990 RRAS2P62070 204 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-210ENST00000525990 C1orf194Q5T5A4 169 aa8.65□□□□□ -1.02
SSBP3-210ENST00000525990 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.65□□□□□ -1.02
SSBP3-210ENST00000525990 ZNF705AQ6ZN79 300 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-210ENST00000525990 OR1B1Q8NGR6 318 aa8.65□□□□□ -1.02
SSBP3-210ENST00000525990 COQ8AQ8NI60 647 aa8.65□□□□□ -1.02
SSBP3-210ENST00000525990 PSENENQ9NZ42 101 aa8.65□□□□□ -1.02
SSBP3-210ENST00000525990 STRAPQ9Y3F4 350 aaKnown RBP8.65□□□□□ -1.02
SSBP3-210ENST00000525990 IGHV4-4A0A075B6R2 117 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 TRAV10A0A0B4J240 114 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 PIGBOS1A0A0B4J2F0 54 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 NAP1L6A6NFF2 107 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 ZNF705FA8MVS1 300 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-210ENST00000525990 C11orf94C9JXX5 98 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 CCSO14618 274 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 SCGB1D2O95969 90 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 FABP1P07148 127 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 METTL15P1P0C7V9 234 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 ZNF705DP0CH99 300 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-210ENST00000525990 ZNF705BP0CI00 300 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-210ENST00000525990 ID1P41134 155 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 EMP1P54849 157 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 C4orf46Q504U0 113 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 FAM78BQ5VT40 261 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 FOXI2Q6ZQN5 318 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 RNF182Q8N6D2 247 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 UHRF2Q96PU4 802 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 RSG1Q9BU20 258 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 C1QTNF4Q9BXJ3 329 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 PLA2G2EQ9NZK7 142 aa8.64□□□□□ -1.03
SSBP3-210ENST00000525990 TRAV8-2A0A0B4J237 113 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 A0A0J9YX75 114 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 H3BRN7 92 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 ISLRO14498 428 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 PLA2G10O15496 165 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 RPP30P78346 268 aaKnown RBP8.63□□□□□ -1.03
SSBP3-210ENST00000525990 ARL16Q0P5N6 197 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 CYP2G1PQ6ZSU1 146 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 C1orf158Q8N1D5 194 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 BPIFCQ8NFQ6 507 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 C16orf92Q96LL3 132 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 PFDN2Q9UHV9 154 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 RCL1Q9Y2P8 373 aaKnown RBP8.63□□□□□ -1.03
SSBP3-210ENST00000525990 VPS13DQ5THJ4 4388 aa8.63□□□□□ -1.03
SSBP3-210ENST00000525990 DEFB131BA0A096LNP1 70 aa8.62□□□□□ -1.03
SSBP3-210ENST00000525990 PRM2P04554 102 aa8.62□□□□□ -1.03
SSBP3-210ENST00000525990 GALR1P47211 349 aa8.62□□□□□ -1.03
SSBP3-210ENST00000525990 IAH1Q2TAA2 248 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-210ENST00000525990 AMTNQ6UX39 209 aa8.62□□□□□ -1.03
SSBP3-210ENST00000525990 TMEM14EPQ6UXP3 125 aa8.62□□□□□ -1.03
SSBP3-210ENST00000525990 TMEM144Q7Z5S9 345 aa8.62□□□□□ -1.03
SSBP3-210ENST00000525990 ZBTB8BQ8NAP8 495 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-210ENST00000525990 SMIM8Q96KF7 97 aa8.62□□□□□ -1.03
SSBP3-210ENST00000525990 TMEM147Q9BVK8 224 aa8.62□□□□□ -1.03
SSBP3-210ENST00000525990 C20orf85Q9H1P6 137 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms