RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 SCRT2Q9NQ03 307 aa9.19□□□□□ -0.94
PTPRK-217ENST00000524534 ZFHX4Q86UP3 3567 aa9.19□□□□□ -0.94
PTPRK-217ENST00000524534 C17orf100A8MU93 164 aa9.19□□□□□ -0.94
PTPRK-217ENST00000524534 H3BTX0 84 aa9.19□□□□□ -0.94
PTPRK-217ENST00000524534 CHEK1O14757 476 aa9.19□□□□□ -0.94
PTPRK-217ENST00000524534 TNFRSF13BO14836 293 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-217ENST00000524534 CDKN1BP46527 198 aa9.19□□□□□ -0.94
PTPRK-217ENST00000524534 DLX6P56179 175 aa9.19□□□□□ -0.94
PTPRK-217ENST00000524534 OTORQ9NRC9 128 aa9.19□□□□□ -0.94
PTPRK-217ENST00000524534 ZNF835Q9Y2P0 537 aa9.19□□□□□ -0.94
PTPRK-217ENST00000524534 ICE1Q9Y2F5 2266 aa9.18□□□□□ -0.94
PTPRK-217ENST00000524534 PPIAL4EA0A075B759 164 aa9.18□□□□□ -0.94
PTPRK-217ENST00000524534 PPIAL4DF5H284 164 aa9.18□□□□□ -0.94
PTPRK-217ENST00000524534 NUDT3O95989 172 aa9.18□□□□□ -0.94
PTPRK-217ENST00000524534 PPIAL4FP0DN26 164 aa9.18□□□□□ -0.94
PTPRK-217ENST00000524534 HOXB4P17483 251 aaPredicted RBP9.18□□□□□ -0.94
PTPRK-217ENST00000524534 TEX45Q8NA69 505 aa9.18□□□□□ -0.94
PTPRK-217ENST00000524534 OR4C5Q8NGB2 326 aa9.18□□□□□ -0.94
PTPRK-217ENST00000524534 H1FXQ92522 213 aaKnown RBP9.18□□□□□ -0.94
PTPRK-217ENST00000524534 MAP1LC3CQ9BXW4 147 aa9.18□□□□□ -0.94
PTPRK-217ENST00000524534 PLCE1Q9P212 2302 aa9.18□□□□□ -0.94
PTPRK-217ENST00000524534 ARFGEF3Q5TH69 2177 aa9.18□□□□□ -0.94
PTPRK-217ENST00000524534 HSBP1L1C9JCN9 74 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 TMEM178BH3BS89 294 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 IGLV2-11P01706 119 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 HLA-DRB1P01911 266 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 COL8A1P27658 744 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 VAMP3Q15836 100 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 ZADH2Q8N4Q0 377 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 DEFB125Q8N687 156 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 MS4A6AQ9H2W1 248 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.17□□□□□ -0.94
PTPRK-217ENST00000524534 TRAV8-1A0A0A6YYK1 113 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 TRBV6-1A0A0K0K1D8 114 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 M0R296 226 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 NDUFB3O43676 98 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 CRYGBP07316 175 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 CEACAM8P31997 349 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-217ENST00000524534 RPL27AP46776 148 aaKnown RBP9.17□□□□□ -0.94
PTPRK-217ENST00000524534 RPS20P60866 119 aaKnown RBP9.17□□□□□ -0.94
PTPRK-217ENST00000524534 ADIPOQQ15848 244 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 ANKRD39Q53RE8 183 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 LYPD2Q6UXB3 125 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 CIARTQ8N365 385 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-217ENST00000524534 TMEM14CQ9P0S9 112 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 HIGD1AQ9Y241 93 aa9.17□□□□□ -0.94
PTPRK-217ENST00000524534 IGHV3-21A0A0B4J1V1 117 aa9.16□□□□□ -0.94
PTPRK-217ENST00000524534 ZNF785A8K8V0 405 aa9.16□□□□□ -0.94
PTPRK-217ENST00000524534 ZNF138P52744 262 aa9.16□□□□□ -0.94
PTPRK-217ENST00000524534 C12orf54Q6X4T0 127 aa9.16□□□□□ -0.94
PTPRK-217ENST00000524534 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
PTPRK-217ENST00000524534 NEU4Q8WWR8 484 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-217ENST00000524534 TMUB1Q9BVT8 246 aa9.16□□□□□ -0.94
PTPRK-217ENST00000524534 HSPB8Q9UJY1 196 aa9.16□□□□□ -0.94
PTPRK-217ENST00000524534 ENSAO43768 121 aaKnown RBP9.16□□□□□ -0.94
PTPRK-217ENST00000524534 LOXP28300 417 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-217ENST00000524534 LINC01545Q5VT33 79 aa9.16□□□□□ -0.94
PTPRK-217ENST00000524534 Q71RC1 249 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-217ENST00000524534 GSX1Q9H4S2 264 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-217ENST00000524534 CTSZQ9UBR2 303 aa9.16□□□□□ -0.94
PTPRK-217ENST00000524534 IGHV3-72A0A0B4J1Y9 119 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 MUC21A0A0G2JKD1 596 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 MUC21A0A140T8X8 626 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 TMEM155Q4W5P6 130 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 MUC21Q5SSG8 566 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 TMEM108Q6UXF1 575 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 F11RQ9Y624 299 aaKnown RBP9.15□□□□□ -0.94
PTPRK-217ENST00000524534 SVILO95425 2214 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 IGHV1-8P0DP01 117 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 PSG1P11464 419 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 SAPCD1Q5SSQ6 148 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 IGFL3Q6UXB1 125 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 GOLT1AQ6ZVE7 132 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 PRNTQ86SH4 94 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 PIP4P1Q86T03 277 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 EXOC3-AS1Q8N2X6 119 aa9.15□□□□□ -0.94
PTPRK-217ENST00000524534 SLC25A39Q9BZJ4 359 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-217ENST00000524534 A0A1B0GUT8 65 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 TEX22C9J3V5 150 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 IGLC1P0CG04 106 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 APELAP0DMC3 54 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 CNTFRP26992 372 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 HTR1DP28221 377 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 LYZP61626 148 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-217ENST00000524534 ASCL5Q7RTU5 278 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 ERASQ7Z444 233 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 TMEM190Q8WZ59 177 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 MCRIP2Q9BUT9 160 aaKnown RBP9.14□□□□□ -0.95
PTPRK-217ENST00000524534 SIGLEC9Q9Y336 463 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 OR2T8A6NH00 312 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 CD5LO43866 347 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 CCL17Q92583 94 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 ZC2HC1AQ96GY0 325 aa9.14□□□□□ -0.95
PTPRK-217ENST00000524534 ARMS2P0C7Q2 107 aa9.13□□□□□ -0.95
PTPRK-217ENST00000524534 FTH1P19P0C7X4 201 aa9.13□□□□□ -0.95
PTPRK-217ENST00000524534 RIGQ13278 110 aa9.13□□□□□ -0.95
PTPRK-217ENST00000524534 ZNF747Q9BV97 191 aa9.13□□□□□ -0.95
PTPRK-217ENST00000524534 TMEM133Q9H2Q1 129 aa9.13□□□□□ -0.95
PTPRK-217ENST00000524534 KAAG1Q9UBP8 84 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms