RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 SMCO3A2RU48 225 aa8.82□□□□□ -1
CLN8-207ENST00000524258 HELTA6NFD8 242 aa8.82□□□□□ -1
CLN8-207ENST00000524258 SOCS3O14543 225 aa8.82□□□□□ -1
CLN8-207ENST00000524258 SSNA1O43805 119 aa8.82□□□□□ -1
CLN8-207ENST00000524258 MPC2O95563 127 aa8.82□□□□□ -1
CLN8-207ENST00000524258 LYL1P12980 280 aa8.82□□□□□ -1
CLN8-207ENST00000524258 PVALBP20472 110 aaPredicted RBP8.82□□□□□ -1
CLN8-207ENST00000524258 BCAP31P51572 246 aa8.82□□□□□ -1
CLN8-207ENST00000524258 SELENOTP62341 195 aa8.82□□□□□ -1
CLN8-207ENST00000524258 NHLH2Q02577 135 aa8.82□□□□□ -1
CLN8-207ENST00000524258 TEPPQ6URK8 271 aa8.82□□□□□ -1
CLN8-207ENST00000524258 BPIFCQ8NFQ6 507 aa8.82□□□□□ -1
CLN8-207ENST00000524258 OR11H7Q8NGC8 314 aa8.82□□□□□ -1
CLN8-207ENST00000524258 CHAC2Q8WUX2 184 aa8.82□□□□□ -1
CLN8-207ENST00000524258 GRAMD2BQ96HH9 432 aa8.82□□□□□ -1
CLN8-207ENST00000524258 NARS2Q96I59 477 aaKnown RBP8.82□□□□□ -1
CLN8-207ENST00000524258 ZNF98A6NK75 572 aa8.81□□□□□ -1
CLN8-207ENST00000524258 E5RGE8 158 aa8.81□□□□□ -1
CLN8-207ENST00000524258 H3BRN7 92 aa8.81□□□□□ -1
CLN8-207ENST00000524258 AGPAT2O15120 278 aa8.81□□□□□ -1
CLN8-207ENST00000524258 S100A11P31949 105 aa8.81□□□□□ -1
CLN8-207ENST00000524258 CMC4P56277 68 aaPredicted RBP8.81□□□□□ -1
CLN8-207ENST00000524258 DEFB131AP59861 70 aa8.81□□□□□ -1
CLN8-207ENST00000524258 PAFAH1B2P68402 229 aa8.81□□□□□ -1
CLN8-207ENST00000524258 PRR20EP86478 221 aa8.81□□□□□ -1
CLN8-207ENST00000524258 PRR20CP86479 221 aa8.81□□□□□ -1
CLN8-207ENST00000524258 PRR20DP86480 221 aa8.81□□□□□ -1
CLN8-207ENST00000524258 PRR20BP86481 221 aa8.81□□□□□ -1
CLN8-207ENST00000524258 PRR20AP86496 221 aa8.81□□□□□ -1
CLN8-207ENST00000524258 FCN2Q15485 313 aa8.81□□□□□ -1
CLN8-207ENST00000524258 SIGLEC15Q6ZMC9 328 aa8.81□□□□□ -1
CLN8-207ENST00000524258 TMEM217Q8N7C4 229 aa8.81□□□□□ -1
CLN8-207ENST00000524258 STXBP6Q8NFX7 210 aa8.81□□□□□ -1
CLN8-207ENST00000524258 RCHY1Q96PM5 261 aa8.81□□□□□ -1
CLN8-207ENST00000524258 GGTLC1Q9BX51 225 aa8.81□□□□□ -1
CLN8-207ENST00000524258 RETNQ9HD89 108 aa8.81□□□□□ -1
CLN8-207ENST00000524258 LOC102724200A0A096LPH7 203 aaPredicted RBP8.8□□□□□ -1
CLN8-207ENST00000524258 DNASE2O00115 360 aaPredicted RBP8.8□□□□□ -1
CLN8-207ENST00000524258 MRPS12O15235 138 aaKnown RBP8.8□□□□□ -1
CLN8-207ENST00000524258 ORM2P19652 201 aa8.8□□□□□ -1
CLN8-207ENST00000524258 NUP62P37198 522 aaPredicted RBP8.8□□□□□ -1
CLN8-207ENST00000524258 AP2S1P53680 142 aaPredicted RBP8.8□□□□□ -1
CLN8-207ENST00000524258 RPL11P62913 178 aaKnown RBP8.8□□□□□ -1
CLN8-207ENST00000524258 EWSR1Q01844 656 aaKnown RBP eCLIP8.8□□□□□ -1
CLN8-207ENST00000524258 LRRC37A5PQ49AS3 106 aa8.8□□□□□ -1
CLN8-207ENST00000524258 SHANK2-AS3Q9BTD1 123 aa8.8□□□□□ -1
CLN8-207ENST00000524258 TMEM147Q9BVK8 224 aa8.8□□□□□ -1
CLN8-207ENST00000524258 SLC25A39Q9BZJ4 359 aaPredicted RBP8.8□□□□□ -1
CLN8-207ENST00000524258 SLC25A32Q9H2D1 315 aa8.8□□□□□ -1
CLN8-207ENST00000524258 SEPSECSQ9HD40 501 aaKnown RBP8.8□□□□□ -1
CLN8-207ENST00000524258 NRN1Q9NPD7 142 aa8.8□□□□□ -1
CLN8-207ENST00000524258 UQCC1Q9NVA1 299 aa8.8□□□□□ -1
CLN8-207ENST00000524258 AGRNO00468 2067 aa8.79□□□□□ -1
CLN8-207ENST00000524258 KIR2DL5BA0A0G2JN68 375 aa8.79□□□□□ -1
CLN8-207ENST00000524258 KIR2DL5BA0A0G2JPC4 375 aa8.79□□□□□ -1
CLN8-207ENST00000524258 RLN2P04090 185 aa8.79□□□□□ -1
CLN8-207ENST00000524258 GIG44P09565 113 aaPredicted RBP8.79□□□□□ -1
CLN8-207ENST00000524258 ZNF688P0C7X2 276 aa8.79□□□□□ -1
CLN8-207ENST00000524258 ATP6V1FQ16864 119 aa8.79□□□□□ -1
CLN8-207ENST00000524258 RGS21Q2M5E4 152 aa8.79□□□□□ -1
CLN8-207ENST00000524258 LEMD1Q68G75 181 aa8.79□□□□□ -1
CLN8-207ENST00000524258 KIR2DL5AQ8N109 375 aa8.79□□□□□ -1
CLN8-207ENST00000524258 OR1B1Q8NGR6 318 aa8.79□□□□□ -1
CLN8-207ENST00000524258 KIR2DL5BQ8NHK3 375 aa8.79□□□□□ -1
CLN8-207ENST00000524258 TMEM37Q8WXS4 190 aa8.79□□□□□ -1
CLN8-207ENST00000524258 SPATA25Q9BR10 227 aa8.79□□□□□ -1
CLN8-207ENST00000524258 OVOL2Q9BRP0 275 aa8.79□□□□□ -1
CLN8-207ENST00000524258 SCRT1Q9BWW7 348 aa8.79□□□□□ -1
CLN8-207ENST00000524258 EDA2RQ9HAV5 297 aa8.79□□□□□ -1
CLN8-207ENST00000524258 DOK5Q9P104 306 aa8.79□□□□□ -1
CLN8-207ENST00000524258 HYPMO75409 117 aa8.78□□□□□ -1
CLN8-207ENST00000524258 CAMLGP49069 296 aa8.78□□□□□ -1
CLN8-207ENST00000524258 OPCMLQ14982 345 aa8.78□□□□□ -1
CLN8-207ENST00000524258 Q5BKY6 102 aa8.78□□□□□ -1
CLN8-207ENST00000524258 MORN5Q5VZ52 161 aa8.78□□□□□ -1
CLN8-207ENST00000524258 MIC13Q5XKP0 118 aa8.78□□□□□ -1
CLN8-207ENST00000524258 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.78□□□□□ -1
CLN8-207ENST00000524258 ZNF546Q86UE3 836 aa8.78□□□□□ -1
CLN8-207ENST00000524258 STX12Q86Y82 276 aa8.78□□□□□ -1
CLN8-207ENST00000524258 WWC2-AS2Q96NR7 200 aa8.78□□□□□ -1
CLN8-207ENST00000524258 UHRF2Q96PU4 802 aa8.78□□□□□ -1
CLN8-207ENST00000524258 ARL6Q9H0F7 186 aa8.78□□□□□ -1
CLN8-207ENST00000524258 ZMAT4Q9H898 229 aa8.78□□□□□ -1
CLN8-207ENST00000524258 MBD2Q9UBB5 411 aa8.78□□□□□ -1
CLN8-207ENST00000524258 FBXL17Q9UF56 701 aa8.78□□□□□ -1
CLN8-207ENST00000524258 PFDN2Q9UHV9 154 aa8.78□□□□□ -1
CLN8-207ENST00000524258 HIGD1AQ9Y241 93 aa8.78□□□□□ -1
CLN8-207ENST00000524258 CSMD3Q7Z407 3707 aa8.77□□□□□ -1.01
CLN8-207ENST00000524258 KNCNA6PVL3 124 aa8.77□□□□□ -1.01
CLN8-207ENST00000524258 RPL35AP18077 110 aaKnown RBP8.77□□□□□ -1.01
CLN8-207ENST00000524258 RPL29P47914 159 aaKnown RBP8.77□□□□□ -1.01
CLN8-207ENST00000524258 HBG1P69891 147 aa8.77□□□□□ -1.01
CLN8-207ENST00000524258 HBG2P69892 147 aa8.77□□□□□ -1.01
CLN8-207ENST00000524258 BAXQ07812 192 aa8.77□□□□□ -1.01
CLN8-207ENST00000524258 PXDC1Q5TGL8 231 aa8.77□□□□□ -1.01
CLN8-207ENST00000524258 Q6ZWC4 215 aa8.77□□□□□ -1.01
CLN8-207ENST00000524258 TRPT1Q86TN4 253 aaKnown RBP8.77□□□□□ -1.01
CLN8-207ENST00000524258 OR8I2Q8N0Y5 310 aa8.77□□□□□ -1.01
CLN8-207ENST00000524258 OR5C1Q8NGR4 320 aa8.77□□□□□ -1.01
CLN8-207ENST00000524258 SLC25A31Q9H0C2 315 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms