RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	SPATA45	Q537H7	98 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	GDF5OS	Q5U4N7	250 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	SLC25A48	Q6ZT89	311 aa	Known RBP	6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	MOB3B	Q86TA1	216 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	MUC15	Q8N387	334 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR5B3	Q8NH48	314 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	TSKU	Q8WUA8	353 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	GRAMD2B	Q96HH9	432 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	SLC25A33	Q9BSK2	321 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	RNASE7	Q9H1E1	156 aa	Known RBP	6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	PLEKHA3	Q9HB20	300 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZFP30	Q9Y2G7	519 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	HEATR1	Q9H583	2144 aa	Known RBP	6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGHV2-26	A0A0B4J1V2	119 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	TEX50	A0A1B0GTY4	177 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033		J3QR06	171 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	CD5L	O43866	347 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	ACTL6B	O94805	426 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	TOMM40	O96008	361 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	CT45A6	P0DMU7	189 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	CT45A5	P0DMU8	189 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	CT45A7	P0DMV0	189 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	SELENOV	P59797	346 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	KRTDAP	P60985	99 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	KRTAP1-1	Q07627	177 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	FXYD3	Q14802	87 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	KIAA1644	Q3SXP7	199 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	IBA57	Q5T440	356 aa	Known RBP	6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	MORN5	Q5VZ52	161 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	PVRIG	Q6DKI7	326 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	CLEC2A	Q6UVW9	174 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF833P	Q6ZTB9	187 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	MOGAT3	Q86VF5	341 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	THAP8	Q8NA92	274 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNRF1	Q8ND25	227 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR2Z1	Q8NG97	314 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR8B3	Q8NGG8	313 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR9G1	Q8NH87	305 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	ORAOV1	Q8WV07	137 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	ITLN1	Q8WWA0	313 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	CACNG8	Q8WXS5	425 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR8B2	Q96RD0	313 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	YAE1D1	Q9NRH1	226 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	SLC35D1	Q9NTN3	355 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	RPUSD1	Q9UJJ7	312 aa	Known RBP	6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	MRPS16	Q9Y3D3	137 aa	Known RBP	6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	TNC	P24821	2201 aa		6.26	□□□□□ -1.41
SPIDR-223	ENST00000524033	HIVEP2	P31629	2446 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGKV1D-37	A0A075B6S9	117 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGHV4-30-2	A0A087WSY4	118 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	CGB1	A6NKQ9	187 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	SRRM4	A7MD48	611 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	PEX7	O00628	323 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR7C2	O60412	319 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	APCS	P02743	223 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	SAA1	P0DJI8	122 aa	Predicted RBP	6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	PMCH	P20382	165 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	USF1	P22415	310 aa	Predicted RBP	6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	APOBEC3A	P31941	199 aa	Predicted RBP	6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	EFNA4	P52798	201 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	PAX2	Q02962	417 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	SLA	Q13239	276 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	FAM120AOS	Q5T036	256 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	TEX36	Q5VZQ5	186 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	C11orf71	Q6IPW1	123 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	MRPL54	Q6P161	138 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	DUX4L9	Q6RFH8	374 aa	Predicted RBP	6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF788	Q6ZQV5	615 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	ATP5L2	Q7Z4Y8	100 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF329	Q86UD4	541 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	STPG4	Q8N801	248 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	TMEM167A	Q8TBQ9	72 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF596	Q8TC21	504 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	LEAP2	Q969E1	77 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	SMIM12	Q96EX1	92 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR2V2	Q96R30	315 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	NDUFA4L2	Q9NRX3	87 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	FN1	P02751	2386 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	ANK2	Q01484	3957 aa		6.25	□□□□□ -1.41
SPIDR-223	ENST00000524033	STAB1	Q9NY15	2570 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	C2orf70	A6NJV1	201 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGHV3-7	P01780	117 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	GATA2	P23769	480 aa	Predicted RBP	6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	GLRX	P35754	106 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	TFPI2	P48307	235 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	HNRNPA3	P51991	378 aa	Known RBP	6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	TCL1A	P56279	114 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	UBE2L3	P68036	154 aa	Known RBP	6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	SSBP2	P81877	361 aa	Predicted RBP	6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	PMCHL1	Q16048	86 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	FAM71F2	Q6NXP2	309 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	PATE2	Q6UY27	113 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF841	Q6ZN19	808 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	LYG1	Q8N1E2	194 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	C11orf42	Q8N5U0	333 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR4A5	Q8NH83	315 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	SPATA3	Q8NHX4	192 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	OSR1	Q8TAX0	266 aa	Predicted RBP	6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	FXYD5	Q96DB9	178 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	URB1-AS1	Q96HZ7	61 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms