RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 MBPP02686 304 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 IL4P05112 153 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 HNRNPCP07910 306 aaKnown RBP eCLIP7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 IGLC1P0CG04 106 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 RD3LP0DJH9 198 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 SLC25A4P12235 298 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 NPY1RP25929 384 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 NKX2-1P43699 371 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 RAP2BP61225 183 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 ID3Q02535 119 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 BSXQ3C1V8 233 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 PSMG4Q5JS54 123 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 ETFRF1Q6IPR1 90 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 AKAP14Q86UN6 197 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 RPP25LQ8N5L8 163 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 RNASEH2CQ8TDP1 164 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 TMEM170AQ8WVE7 144 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 ST6GAL2Q96JF0 529 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 RBKSQ9H477 322 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 HSPB7Q9UBY9 170 aa7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 PAIP2BQ9ULR5 123 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-235ENST00000522730 HELTA6NFD8 242 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 FAM90A26D6RGX4 464 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 K7EPK0 472 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 DEDDO75618 318 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 ATF4P18848 351 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 S100A10P60903 97 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 YPEL3P61236 119 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 POLR2GP62487 172 aaKnown RBP eCLIP7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 RAB32Q13637 225 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 USF2Q15853 346 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 LRRC37A5PQ49AS3 106 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 C16orf54Q6UWD8 224 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 NOXA1Q86UR1 476 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 OR51G1Q8NGK1 321 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 OR2T35Q8NGX2 323 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 PPP1R1CQ8WVI7 109 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 RAB40CQ96S21 281 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 PBDC1Q9BVG4 233 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 MFFQ9GZY8 342 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 CACFD1Q9UGQ2 172 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 RCL1Q9Y2P8 373 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 AGRNO00468 2067 aa7.47□□□□□ -1.21
CTNNA1-235ENST00000522730 IGHV4-28A0A0C4DH34 117 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 IGLL5B9A064 214 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 G3V3Q6 166 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 SMLR1H3BR10 107 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 PFDN1O60925 122 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 MED6O75586 246 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 PSG1P11464 419 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 AP2S1P53680 142 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 CD300CQ08708 224 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 FGL1Q08830 312 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 Q5BKY6 102 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 MORN3Q6PF18 240 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 TRPT1Q86TN4 253 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 TCTE3Q8IZS6 198 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 DTD1Q8TEA8 209 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 C2CD4CQ8TF44 421 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 DCANP1Q8TF63 244 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 MAGT1Q9H0U3 335 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 LSM5Q9Y4Y9 91 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 U3KQ87 197 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 U3KQE9 123 aa7.46□□□□□ -1.22
CTNNA1-235ENST00000522730 ELOA3CA0A087WX78 387 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 ZFP92A6NM28 416 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 H0YIZ8 118 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 WRBO00258 174 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 SYNGR2O43760 224 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 SSSCA1O60232 199 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 MPC2O95563 127 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 TOMM40O96008 361 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 IGKV3-20P01619 116 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 GIG44P09565 113 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 RBMY1A1P0DJD3 496 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 RBMY1CP0DJD4 496 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 SPP1P10451 314 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 IAPPP10997 89 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 OR2F1Q13607 317 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 RBMY1FQ15415 496 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 GLMPQ8WWB7 406 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 PPP1R14BQ96C90 147 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 LINC00052Q96N35 136 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 RNF126Q9BV68 326 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 C11orf68Q9H3H3 251 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 MBD2Q9UBB5 411 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 XCL2Q9UBD3 114 aa7.45□□□□□ -1.22
CTNNA1-235ENST00000522730 L7N2F9 121 aa7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 RLN2P04090 185 aa7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 PET100P0DJ07 73 aa7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 C4BPBP20851 252 aa7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 HLA-DMBP28068 263 aa7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 FXYD7P58549 80 aa7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 DEFB1P60022 68 aa7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 SNRPD3P62318 126 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 VAMP2P63027 116 aa7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 ZNF90Q03938 601 aa7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 GAMTQ14353 236 aa7.44□□□□□ -1.22
CTNNA1-235ENST00000522730 SIGLEC15Q6ZMC9 328 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms