RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 FAM213BQ8TBF2 198 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 RCC1LQ96I51 464 aaKnown RBP10.05□□□□□ -0.8
CPNE3-205ENST00000522240 ACTR3CQ9C0K3 210 aaPredicted RBP10.05□□□□□ -0.8
CPNE3-205ENST00000522240 HYPMO75409 117 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 HSPB1P04792 205 aaKnown RBP10.04□□□□□ -0.8
CPNE3-205ENST00000522240 NMBP08949 121 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 S100A7P31151 101 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 RAB14P61106 215 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 GCSAMLQ5JQS6 135 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 C10orf113Q5VZT2 155 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 FAM122CQ6P4D5 195 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 TOMM20LQ6UXN7 152 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 KLHL30-AS1Q8NEE0 82 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 OR1B1Q8NGR6 318 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 OR5B12Q96R08 314 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 SLC25A22Q9H936 323 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 DNAJC4Q9NNZ3 241 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 HIGD1AQ9Y241 93 aa10.04□□□□□ -0.8
CPNE3-205ENST00000522240 A0A1W2PPV4 95 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 NUDT19A8MXV4 375 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 ORM2P19652 201 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 ZP3P21754 424 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 FHITP49789 147 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 USF2Q15853 346 aaPredicted RBP10.03□□□□□ -0.8
CPNE3-205ENST00000522240 ZNF726P1Q15940 193 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 FAM78BQ5VT40 261 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 PATE2Q6UY27 113 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 GPHB5Q86YW7 130 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 MBD3L1Q8WWY6 194 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 TMEM37Q8WXS4 190 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 TMEM190Q8WZ59 177 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 CITED2Q99967 270 aaPredicted RBP10.03□□□□□ -0.8
CPNE3-205ENST00000522240 PBDC1Q9BVG4 233 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 MRPL27Q9P0M9 148 aaKnown RBP10.03□□□□□ -0.8
CPNE3-205ENST00000522240 DOK5Q9P104 306 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 RNF24Q9Y225 148 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 FUT9Q9Y231 359 aa10.03□□□□□ -0.8
CPNE3-205ENST00000522240 IGHV4OR15-8A0A075B7B6 117 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 A0A087WW49 117 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 H3BRN7 92 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 HBE1P02100 147 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 H2AFB1P0C5Y9 115 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 TAS2R45P59539 299 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 RPEL1Q2QD12 228 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 KRTAP24-1Q3LI83 254 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 AWAT1Q58HT5 328 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 NDUFA11Q86Y39 141 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 LYPD6BQ8NI32 183 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 RAB24Q969Q5 203 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 SEPSECSQ9HD40 501 aaKnown RBP10.02□□□□□ -0.81
CPNE3-205ENST00000522240 RABAC1Q9UI14 185 aa10.02□□□□□ -0.81
CPNE3-205ENST00000522240 TRAV1-1A0A0B4J248 108 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 IGHV3-35A0A0C4DH35 117 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 MAP1LC3B2A6NCE7 125 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 LINC01619G3V211 115 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 TEX46H3BTG2 121 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 LGALS9O00182 355 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 STAG3L2P0CL84 134 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 STAG3L3P0CL85 134 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 FHL3Q13643 280 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 FAM106AQ4KMX7 169 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 KHDC3LQ587J8 217 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 C18orf65Q6ZTR6 163 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 SSX7Q7RTT5 188 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 LINC00305Q7Z4B0 112 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 C11orf44Q8N8P7 122 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 SHANK2-AS3Q9BTD1 123 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 SLC25A39Q9BZJ4 359 aaPredicted RBP10.01□□□□□ -0.81
CPNE3-205ENST00000522240 MAP1LC3BQ9GZQ8 125 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 TECRQ9NZ01 308 aaKnown RBP10.01□□□□□ -0.81
CPNE3-205ENST00000522240 PFDN2Q9UHV9 154 aa10.01□□□□□ -0.81
CPNE3-205ENST00000522240 A8MWP6 167 aa10□□□□□ -0.81
CPNE3-205ENST00000522240 C8orf88P0DMB2 117 aa10□□□□□ -0.81
CPNE3-205ENST00000522240 CRYBB3P26998 211 aa10□□□□□ -0.81
CPNE3-205ENST00000522240 HOXD3P31249 432 aaPredicted RBP10□□□□□ -0.81
CPNE3-205ENST00000522240 KRTAP10-3P60369 221 aa10□□□□□ -0.81
CPNE3-205ENST00000522240 PQLC2Q6ZP29 291 aa10□□□□□ -0.81
CPNE3-205ENST00000522240 C1QL4Q86Z23 238 aa10□□□□□ -0.81
CPNE3-205ENST00000522240 DPF1Q92782 380 aa10□□□□□ -0.81
CPNE3-205ENST00000522240 UHRF2Q96PU4 802 aa10□□□□□ -0.81
CPNE3-205ENST00000522240 METTL26Q96S19 204 aa10□□□□□ -0.81
CPNE3-205ENST00000522240 UFC1Q9Y3C8 167 aa10□□□□□ -0.81
CPNE3-205ENST00000522240 K7EMT4 169 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 DEFB136Q30KP8 78 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 MORN5Q5VZ52 161 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 SPATA31B1PQ5VZV4 182 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 LCN15Q6UWW0 184 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 UNQ9165/PRO28630Q6UXU0 137 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 MIR17HGQ75NE6 70 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 STXBP6Q8NFX7 210 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 OR11H1Q8NG94 326 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 OR1N2Q8NGR9 330 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 SFT2D1Q8WV19 159 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 NARS2Q96I59 477 aaKnown RBP9.99□□□□□ -0.81
CPNE3-205ENST00000522240 FAM167A-AS1Q96KT0 104 aa9.99□□□□□ -0.81
CPNE3-205ENST00000522240 DAZ1Q9NQZ3 744 aaKnown RBP9.99□□□□□ -0.81
CPNE3-205ENST00000522240 ZNF98A6NK75 572 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 CXorf1O96002 111 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 ARL14EPLP0DKL9 152 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 NPPCP23582 126 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms