RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 KLF5Q13887 457 aaPredicted RBP10.23□□□□□ -0.77
CLK4-210ENST00000522136 TM4SF20Q53R12 229 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 C10orf113Q5VZT2 155 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 FAM122CQ6P4D5 195 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 C3orf56Q8N813 242 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 PCNPQ8WW12 178 aaKnown RBP10.23□□□□□ -0.77
CLK4-210ENST00000522136 TMEM190Q8WZ59 177 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 DLX4Q92988 240 aaPredicted RBP10.23□□□□□ -0.77
CLK4-210ENST00000522136 ZNF747Q9BV97 191 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 IGHV3OR16-13A0A075B7E8 117 aa10.22□□□□□ -0.77
CLK4-210ENST00000522136 IGHV3-74A0A0B4J1X5 117 aa10.22□□□□□ -0.77
CLK4-210ENST00000522136 HMGB3O15347 200 aaKnown RBP10.22□□□□□ -0.77
CLK4-210ENST00000522136 APOHP02749 345 aaPredicted RBP10.22□□□□□ -0.77
CLK4-210ENST00000522136 FHL3Q13643 280 aa10.22□□□□□ -0.77
CLK4-210ENST00000522136 ZNF726P1Q15940 193 aa10.22□□□□□ -0.77
CLK4-210ENST00000522136 FAM78BQ5VT40 261 aa10.22□□□□□ -0.77
CLK4-210ENST00000522136 LEMD1Q68G75 181 aa10.22□□□□□ -0.77
CLK4-210ENST00000522136 SSX7Q7RTT5 188 aa10.22□□□□□ -0.77
CLK4-210ENST00000522136 FAM213BQ8TBF2 198 aa10.22□□□□□ -0.77
CLK4-210ENST00000522136 HIGD1AQ9Y241 93 aa10.22□□□□□ -0.77
CLK4-210ENST00000522136 COL6A5A8TX70 2615 aa10.22□□□□□ -0.77
CLK4-210ENST00000522136 TRAV5A0A0B4J249 113 aa10.21□□□□□ -0.77
CLK4-210ENST00000522136 IGHV3-66A0A0C4DH42 116 aa10.21□□□□□ -0.77
CLK4-210ENST00000522136 IFNA7P01567 189 aa10.21□□□□□ -0.77
CLK4-210ENST00000522136 MBP02144 154 aa10.21□□□□□ -0.77
CLK4-210ENST00000522136 MIR17HGQ75NE6 70 aa10.21□□□□□ -0.77
CLK4-210ENST00000522136 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.77
CLK4-210ENST00000522136 OR1L4Q8NGR5 311 aa10.21□□□□□ -0.77
CLK4-210ENST00000522136 GATAD1Q8WUU5 269 aa10.21□□□□□ -0.77
CLK4-210ENST00000522136 MDFIQ99750 246 aa10.21□□□□□ -0.77
CLK4-210ENST00000522136 SLC25A22Q9H936 323 aa10.21□□□□□ -0.77
CLK4-210ENST00000522136 ELOA3CA0A087WX78 387 aaPredicted RBP10.21□□□□□ -0.78
CLK4-210ENST00000522136 UMAD1C9J7I0 102 aa10.21□□□□□ -0.78
CLK4-210ENST00000522136 PXDC1Q5TGL8 231 aa10.21□□□□□ -0.78
CLK4-210ENST00000522136 C1QL4Q86Z23 238 aa10.21□□□□□ -0.78
CLK4-210ENST00000522136 SCRT1Q9BWW7 348 aa10.21□□□□□ -0.78
CLK4-210ENST00000522136 SLC25A39Q9BZJ4 359 aaPredicted RBP10.21□□□□□ -0.78
CLK4-210ENST00000522136 UBQLN2Q9UHD9 624 aa10.21□□□□□ -0.78
CLK4-210ENST00000522136 RABAC1Q9UI14 185 aa10.21□□□□□ -0.78
CLK4-210ENST00000522136 SELENOKQ9Y6D0 94 aa10.21□□□□□ -0.78
CLK4-210ENST00000522136 STAB1Q9NY15 2570 aa10.2□□□□□ -0.78
CLK4-210ENST00000522136 NPPCP23582 126 aa10.2□□□□□ -0.78
CLK4-210ENST00000522136 RAB24Q969Q5 203 aa10.2□□□□□ -0.78
CLK4-210ENST00000522136 METTL26Q96S19 204 aa10.2□□□□□ -0.78
CLK4-210ENST00000522136 PFDN5Q99471 154 aa10.2□□□□□ -0.78
CLK4-210ENST00000522136 A0A1W2PPV4 95 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 ZNF705EA8MWA4 302 aaPredicted RBP10.19□□□□□ -0.78
CLK4-210ENST00000522136 LGALS9O00182 355 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 MYCNOSP40205 109 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 CDC34P49427 236 aaPredicted RBP10.19□□□□□ -0.78
CLK4-210ENST00000522136 REC114Q7Z4M0 266 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 RNF141Q8WVD5 230 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 ACTR3CQ9C0K3 210 aaPredicted RBP10.19□□□□□ -0.78
CLK4-210ENST00000522136 DAZ1Q9NQZ3 744 aaKnown RBP10.19□□□□□ -0.78
CLK4-210ENST00000522136 FUT9Q9Y231 359 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 A0A1B0GV50 99 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 TMEM213A2RRL7 107 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 SEC14L6B5MCN3 397 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 H3BRN7 92 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 CRYBB3P26998 211 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 RAB5CP51148 216 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 RHOBP62745 196 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 LCN15Q6UWW0 184 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 SHANK2-AS3Q9BTD1 123 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 UFC1Q9Y3C8 167 aa10.19□□□□□ -0.78
CLK4-210ENST00000522136 ZNF98A6NK75 572 aa10.18□□□□□ -0.78
CLK4-210ENST00000522136 K7EMT4 169 aa10.18□□□□□ -0.78
CLK4-210ENST00000522136 PF4P02776 101 aa10.18□□□□□ -0.78
CLK4-210ENST00000522136 FGF8P55075 233 aaPredicted RBP10.18□□□□□ -0.78
CLK4-210ENST00000522136 OR9G4Q8NGQ1 327 aa10.18□□□□□ -0.78
CLK4-210ENST00000522136 U3KQE9 123 aa10.18□□□□□ -0.78
CLK4-210ENST00000522136 C2orf70A6NJV1 201 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 A8MWP6 167 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 SNRPCP09234 159 aaKnown RBP10.17□□□□□ -0.78
CLK4-210ENST00000522136 SHISA2Q6UWI4 295 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 ADAMTSL5Q6ZMM2 481 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 ZNF767PQ75MW2 155 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 SPATA3Q8NHX4 192 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 FAM167A-AS1Q96KT0 104 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 SLC25A2Q9BXI2 301 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 IGHV7-4-1A0A0J9YVY3 117 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 CTXND1A0A1B0GTU2 59 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 OVOL1O14753 267 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 BUB3O43684 328 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 H2AFB1P0C5Y9 115 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 DPPA3Q6W0C5 159 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 IL34Q6ZMJ4 242 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 OR4F17Q8NGA8 305 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 SFT2D1Q8WV19 159 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 OR4F4Q96R69 305 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 RNF2Q99496 336 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 RHPN1-AS1Q9BWJ2 59 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 MRPL32Q9BYC8 188 aaKnown RBP10.17□□□□□ -0.78
CLK4-210ENST00000522136 SMPXQ9UHP9 88 aa10.17□□□□□ -0.78
CLK4-210ENST00000522136 C8orf88P0DMB2 117 aa10.16□□□□□ -0.78
CLK4-210ENST00000522136 CBLN1P23435 193 aa10.16□□□□□ -0.78
CLK4-210ENST00000522136 ZNF503Q96F45 646 aa10.16□□□□□ -0.78
CLK4-210ENST00000522136 TECRQ9NZ01 308 aaKnown RBP10.16□□□□□ -0.78
CLK4-210ENST00000522136 MAP1LC3B2A6NCE7 125 aa10.15□□□□□ -0.78
CLK4-210ENST00000522136 CHEK1O14757 476 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms