RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CXCL2P19875 107 aa7.01□□□□□ -1.29
CLK4-209ENST00000521621 PSMB3P49720 205 aa7.01□□□□□ -1.29
CLK4-209ENST00000521621 AKR1C1Q04828 323 aa7.01□□□□□ -1.29
CLK4-209ENST00000521621 MORN3Q6PF18 240 aaPredicted RBP7.01□□□□□ -1.29
CLK4-209ENST00000521621 GATAD1Q8WUU5 269 aa7.01□□□□□ -1.29
CLK4-209ENST00000521621 TMEM147Q9BVK8 224 aa7.01□□□□□ -1.29
CLK4-209ENST00000521621 NRN1Q9NPD7 142 aa7.01□□□□□ -1.29
CLK4-209ENST00000521621 A8MTW9 85 aa7□□□□□ -1.29
CLK4-209ENST00000521621 GOSR2O14653 212 aa7□□□□□ -1.29
CLK4-209ENST00000521621 METTL15P1P0C7V9 234 aa7□□□□□ -1.29
CLK4-209ENST00000521621 SLC38A11Q08AI6 406 aa7□□□□□ -1.29
CLK4-209ENST00000521621 ARL16Q0P5N6 197 aa7□□□□□ -1.29
CLK4-209ENST00000521621 STX12Q86Y82 276 aa7□□□□□ -1.29
CLK4-209ENST00000521621 SHANK2-AS3Q9BTD1 123 aa7□□□□□ -1.29
CLK4-209ENST00000521621 ELOA3CA0A087WX78 387 aaPredicted RBP7□□□□□ -1.29
CLK4-209ENST00000521621 RPL29P47914 159 aaKnown RBP7□□□□□ -1.29
CLK4-209ENST00000521621 H2BFSP57053 126 aa7□□□□□ -1.29
CLK4-209ENST00000521621 RAB31Q13636 194 aa7□□□□□ -1.29
CLK4-209ENST00000521621 LSM5Q9Y4Y9 91 aaKnown RBP7□□□□□ -1.29
CLK4-209ENST00000521621 FAM25EA8MYX2 175 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 H3BP45 60 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 SPP1P10451 314 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 PRR20EP86478 221 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 PRR20CP86479 221 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 PRR20DP86480 221 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 PRR20BP86481 221 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 PRR20AP86496 221 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 UQCC1Q9NVA1 299 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 NOTCH3Q9UM47 2321 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 IGSF23A1L1A6 192 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 DNASE2O00115 360 aaPredicted RBP6.99□□□□□ -1.29
CLK4-209ENST00000521621 CCNKO75909 580 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 OPCMLQ14982 345 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 OXA1LQ15070 435 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 RCHY1Q96PM5 261 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 RNF126Q9BV68 326 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 KCNIP2Q9NS61 270 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 CLEC5AQ9NY25 188 aa6.99□□□□□ -1.29
CLK4-209ENST00000521621 IGHV3OR16-8A0A075B7F1 116 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 ZNF98A6NK75 572 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 C3orf84H3BNL1 204 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 ISLRO14498 428 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 HYPMO75409 117 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 LINC00869P0C866 280 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 TRPT1Q86TN4 253 aaKnown RBP6.98□□□□□ -1.29
CLK4-209ENST00000521621 RNF183Q96D59 192 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 MGST2Q99735 147 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 EDA2RQ9HAV5 297 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 HIGD1AQ9Y241 93 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 ALG5Q9Y673 324 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
CLK4-209ENST00000521621 AGPAT2O15120 278 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 SSNA1O43805 119 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 MPC2O95563 127 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 RPL7P18124 248 aaKnown RBP6.98□□□□□ -1.29
CLK4-209ENST00000521621 ID1P41134 155 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 GALR1P47211 349 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 LYZP61626 148 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 SNRPD3P62318 126 aaKnown RBP6.98□□□□□ -1.29
CLK4-209ENST00000521621 RGS21Q2M5E4 152 aa6.98□□□□□ -1.29
CLK4-209ENST00000521621 TMEM182Q6ZP80 229 aaPredicted RBP6.98□□□□□ -1.29
CLK4-209ENST00000521621 SLC25A39Q9BZJ4 359 aaPredicted RBP6.98□□□□□ -1.29
CLK4-209ENST00000521621 FAM24AA6NFZ4 105 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 H0YIZ8 118 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 MRPS12O15235 138 aaKnown RBP6.97□□□□□ -1.29
CLK4-209ENST00000521621 BCAP31P51572 246 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 EWSR1Q01844 656 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLK4-209ENST00000521621 FGL1Q08830 312 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 OR1L4Q8NGR5 311 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 IL17DQ8TAD2 202 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 PFDN5Q99471 154 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 PAIP2BQ9ULR5 123 aaKnown RBP6.97□□□□□ -1.29
CLK4-209ENST00000521621 SORL1Q92673 2214 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 ZNF253O75346 499 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 CAV2P51636 162 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 S100A10P60903 97 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 PPP1R1CQ8WVI7 109 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 C17orf77Q96MU5 243 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 HSPB11Q9Y547 144 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 IGHV3-49A0A0A0MS15 119 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 GIPP09681 153 aaPredicted RBP6.97□□□□□ -1.29
CLK4-209ENST00000521621 RAP2BP61225 183 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 ASCL2Q99929 193 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 OVOL2Q9BRP0 275 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 CSTL1Q9H114 145 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 WFDC10AQ9H1F0 79 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 SLC25A32Q9H2D1 315 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 TMEM14CQ9P0S9 112 aa6.97□□□□□ -1.29
CLK4-209ENST00000521621 GUK1Q16774 197 aa6.96□□□□□ -1.3
CLK4-209ENST00000521621 PATE2Q6UY27 113 aa6.96□□□□□ -1.3
CLK4-209ENST00000521621 FOXI2Q6ZQN5 318 aa6.96□□□□□ -1.3
CLK4-209ENST00000521621 STXBP6Q8NFX7 210 aa6.96□□□□□ -1.3
CLK4-209ENST00000521621 SAV1Q9H4B6 383 aaPredicted RBP6.96□□□□□ -1.3
CLK4-209ENST00000521621 OR5AC2Q9NZP5 309 aa6.96□□□□□ -1.3
CLK4-209ENST00000521621 HLA-DRB4P13762 266 aa6.96□□□□□ -1.3
CLK4-209ENST00000521621 CAMLGP49069 296 aa6.96□□□□□ -1.3
CLK4-209ENST00000521621 FAM24BQ8N5W8 94 aa6.96□□□□□ -1.3
CLK4-209ENST00000521621 PBDC1Q9BVG4 233 aa6.96□□□□□ -1.3
CLK4-209ENST00000521621 UBQLN2Q9UHD9 624 aa6.96□□□□□ -1.3
CLK4-209ENST00000521621 HLA-DRB4X5D2U9 266 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms