RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 FAM90A8PA6NJQ4 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A7PA6NKC0 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A22PA8MWA6 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A12PA8MX19 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A5PA8MXJ8 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A23PA8MXZ1 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 H0YJW9 148 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 TIMM8AO60220 97 aaPredicted RBP8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 MOSP00540 346 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A15PP0C7V4 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A13PP0C7W8 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A14PP0C7W9 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A24PP0C7X0 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 CNEP1R1Q8N9A8 125 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 Q8TCH9 128 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 IGHV5-10-1A0A0J9YXX1 117 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 A0A1W2PR77 199 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 COX7A2P2O60397 106 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 NCR2O95944 276 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 SMIM13P0DJ93 91 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 KIR2DL2P43627 348 aaPredicted RBP8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 NXPH1P58417 271 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 TBR1Q16650 682 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 TIMM23BQ5SRD1 257 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 Q71RC1 249 aaPredicted RBP8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM214BQ7L5A3 538 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 ASCL5Q7RTU5 278 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 DDB2Q92466 427 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 CDX2Q99626 313 aaPredicted RBP8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 SMIM9A6NGZ8 99 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 SRSF1Q07955 248 aaKnown RBP eCLIP8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 GAGE2BQ13066 116 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 GUSBP1Q15486 140 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 GAGE2EQ4V326 116 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 GAGE2DQ9UEU5 116 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 CFAP47Q6ZTR5 3102 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 TRBV9A0A0B4J1U6 114 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 PIGBOS1A0A0B4J2F0 54 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 PGPA6NDG6 321 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 HLA-DRB1P01911 266 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 ATP5IP56385 69 aaPredicted RBP8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 RBMXL3Q8N7X1 1067 aaKnown RBP8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 COQ2Q96H96 371 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 SPANXB1Q9NS25 103 aaPredicted RBP8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 MPV17P39210 176 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 OR1C1Q15619 314 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 C10orf55Q5SWW7 151 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 PEAR1Q5VY43 1037 aaPredicted RBP8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 VGLL1Q99990 258 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 OSTCQ9NRP0 149 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 F5H768 121 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 APOHP02749 345 aaPredicted RBP8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 ACP1P24666 158 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 Q6ZS49 121 aa8.23□□□□□ -1.09
PDGFRB-207ENST00000520579 XGP55808 180 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 MBNL2Q5VZF2 373 aaKnown RBP8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM159AQ6UWV7 190 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 Q6ZUT4 128 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 PTPRZ1P23471 2315 aaPredicted RBP8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 TET2Q6N021 2002 aaPredicted RBP8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 LOC107984640A0A0U1RRK4 108 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 PRR33A8MZF0 331 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 VWC2LB2RUY7 222 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 C5orf67F2Z3F1 127 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 LRRC29Q8WV35 223 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 TMEM167BQ9NRX6 74 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 OOEPA6NGQ2 149 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 FOLR3P41439 243 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 MS4A6AQ9H2W1 248 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 MPC1Q9Y5U8 109 aa8.22□□□□□ -1.09
PDGFRB-207ENST00000520579 ABCA4P78363 2273 aa8.21□□□□□ -1.09
PDGFRB-207ENST00000520579 hADV38S2A0JD32 116 aa8.21□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM106CPP0CH98 169 aa8.21□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM106AQ4KMX7 169 aa8.21□□□□□ -1.09
PDGFRB-207ENST00000520579 PAXXQ9BUH6 204 aa8.21□□□□□ -1.09
PDGFRB-207ENST00000520579 IGKV1OR2-108A0A075B7D4 117 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 IGLV3-32A0A0A0MS00 114 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 IGHV1-45A0A0A0MS14 117 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 PROP1O75360 226 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 P01737 135 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 CT45A6P0DMU7 189 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 CT45A5P0DMU8 189 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 CT45A7P0DMV0 189 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 COX6A1P12074 109 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 DUTP33316 252 aaKnown RBP8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 TAS2R45P59539 299 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 CT45A1Q5HYN5 189 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 HCP5Q6MZN7 132 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 PRNTQ86SH4 94 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 CT45A3Q8NHU0 189 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 ZNF503Q96F45 646 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 DUX5Q96PT3 197 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 C9JCJ5 164 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 FKBP2P26885 142 aaKnown RBP8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 B3GALT5-AS1P59052 145 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 CACNG7P62955 275 aa8.21□□□□□ -1.1
PDGFRB-207ENST00000520579 RASL11AQ6T310 242 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms