RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 AKR1C4P17516 323 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 UCP1P25874 307 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 INPP1P49441 399 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 INSL3P51460 131 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 AKR1C2P52895 323 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 HSPE1P61604 102 aaKnown RBP5.12□□□□□ -1.59
SDCBP-208ENST00000520228 WT1-ASQ06250 92 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 EGFEM1PQ0D2K5 195 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 EXOSC2Q13868 293 aaKnown RBP5.12□□□□□ -1.59
SDCBP-208ENST00000520228 KLF5Q13887 457 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-208ENST00000520228 TATDN3Q17R31 274 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 RPEL1Q2QD12 228 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 KLK9Q2XQG4 91 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 TRIQKQ629K1 86 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 ZNF57Q68EA5 555 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-208ENST00000520228 ZNF429Q86V71 674 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 SGPP2Q8IWX5 399 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 RNASE11Q8TAA1 199 aaKnown RBP5.12□□□□□ -1.59
SDCBP-208ENST00000520228 GLYATL2Q8WU03 294 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 DEDD2Q8WXF8 326 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 EEF1AKMT3Q96AZ1 226 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 TMEM56Q96MV1 263 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 OR4C12Q96R67 309 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 PYGO2Q9BRQ0 406 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 TMEM222Q9H0R3 208 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 KLK9Q9UKQ9 250 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 TRBV7-1A0A0A6YYK4 115 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 LINC00854A0A1B0GVQ3 168 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 GGCTO75223 188 aaKnown RBP5.11□□□□□ -1.59
SDCBP-208ENST00000520228 IFNA17P01571 189 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 IGHV3-23P01764 117 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 P0C879 139 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 SYNJ2BPP57105 145 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 PRCDQ00LT1 54 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 SLC25A24Q6NUK1 477 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 TMED4Q7Z7H5 227 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 SELENOHQ8IZQ5 122 aaKnown RBP5.11□□□□□ -1.59
SDCBP-208ENST00000520228 OR1L6Q8NGR2 347 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 MRAPQ8TCY5 172 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 RBPMSQ93062 196 aaKnown RBP5.11□□□□□ -1.59
SDCBP-208ENST00000520228 CXorf58Q96LI9 332 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 SLC25A21Q9BQT8 299 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-208ENST00000520228 PDCD10Q9BUL8 212 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 JPT2Q9H910 190 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 F11RQ9Y624 299 aaKnown RBP5.11□□□□□ -1.59
SDCBP-208ENST00000520228 S4R3C0 116 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 TMEM56-RWDD3S4R434 201 aa5.11□□□□□ -1.59
SDCBP-208ENST00000520228 IGKV3D-20A0A0C4DH25 116 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 A0A0G2JRQ6 117 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 WI2-2373I1.2A0A1W2PRP0 233 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 NAP1L6A6NFF2 107 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 MFSD2BA6NFX1 497 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 CENPXA8MT69 81 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 PPP5D1E7EU14 171 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 HLA-AP01891 365 aaKnown RBP5.1□□□□□ -1.59
SDCBP-208ENST00000520228 ANXA3P12429 323 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 DSCR10P59022 87 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 ERHP84090 104 aaKnown RBP5.1□□□□□ -1.59
SDCBP-208ENST00000520228 SPINK9Q5DT21 86 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 DEFB121Q5J5C9 76 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 CLEC19AQ6UXS0 136 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 POM121L12Q8N7R1 296 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 SLC35G3Q8N808 338 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 CSNK1G2-AS1Q8NCQ2 148 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 OR9G4Q8NGQ1 327 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 OR1B1Q8NGR6 318 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 OR1P1Q8NH06 330 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 LHFPL5Q8TAF8 219 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 VN1R17PQ8TDU5 208 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 IL22RA2Q969J5 263 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 TMEM230Q96A57 120 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 GPR146Q96CH1 333 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 GALNT14Q96FL9 552 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 RCHY1Q96PM5 261 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 RAB40CQ96S21 281 aa5.1□□□□□ -1.59
SDCBP-208ENST00000520228 SDHCQ99643 169 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-208ENST00000520228 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-208ENST00000520228 PLXNB1O43157 2135 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 PIGBOS1A0A0B4J2F0 54 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 IGHV3-16A0A0C4DH30 117 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 K7EIL1 84 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 IL7P13232 177 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 SNCAP37840 140 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 CCR6P51684 374 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 MFAP2P55001 183 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 SPCS3P61009 180 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 SUPT4H1P63272 117 aaKnown RBP5.09□□□□□ -1.59
SDCBP-208ENST00000520228 CNPY1Q3B7I2 92 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 TMEM128Q5BJH2 165 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 MUC21Q5SSG8 566 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 IL34Q6ZMJ4 242 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 LINC00299Q6ZSB3 139 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 GPHB5Q86YW7 130 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 LGI3Q8N145 548 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 ZNF502Q8TBZ5 544 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 PCNPQ8WW12 178 aaKnown RBP5.09□□□□□ -1.59
SDCBP-208ENST00000520228 ENY2Q9NPA8 101 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 ZC4H2Q9NQZ6 224 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 C21orf62Q9NYP8 219 aa5.09□□□□□ -1.59
SDCBP-208ENST00000520228 CACFD1Q9UGQ2 172 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms