RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 BCL2L11O43521 198 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 HNRNPCP07910 306 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLN8-202ENST00000517514 ORM2P19652 201 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 NPPCP23582 126 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 ATP6V0CP27449 155 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 B2MP61769 119 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 ZFP69Q49AA0 526 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 UHRF2Q96PU4 802 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 ARPC5LQ9BPX5 153 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 GINS3Q9BRX5 216 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 PBDC1Q9BVG4 233 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 ELOVL1Q9BW60 279 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 RHPN1-AS1Q9BWJ2 59 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 ARL6Q9H0F7 186 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 SLC39A9Q9NUM3 307 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 PEMTQ9UBM1 199 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 ZNF785A8K8V0 405 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 TAAR5O14804 337 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 BUB3O43684 328 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 SAP30O75446 220 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 SCGB2A1O75556 95 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 CFDP00746 253 aaPredicted RBP7.44□□□□□ -1.22
CLN8-202ENST00000517514 IFNA5P01569 189 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 FABP1P07148 127 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 KRTAP10-11P60412 298 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 CD300EQ496F6 205 aaPredicted RBP7.44□□□□□ -1.22
CLN8-202ENST00000517514 C9orf66Q5T8R8 295 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 SPATA31B1PQ5VZV4 182 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 C16orf54Q6UWD8 224 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 HSD17B11Q8NBQ5 300 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 OR1B1Q8NGR6 318 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 GLMPQ8WWB7 406 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 MARC2Q969Z3 335 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 METTL26Q96S19 204 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 RNF2Q99496 336 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 SCRT1Q9BWW7 348 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 RABAC1Q9UI14 185 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 BOLA1Q9Y3E2 137 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 TIMM9Q9Y5J7 89 aa7.44□□□□□ -1.22
CLN8-202ENST00000517514 TRAV5A0A0B4J249 113 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 ZNF98A6NK75 572 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 MRPS12O15235 138 aaKnown RBP7.43□□□□□ -1.22
CLN8-202ENST00000517514 HYPMO75409 117 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 EGFEM1PQ0D2K5 195 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 RAB31Q13636 194 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 ZNF266Q14584 549 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 LEMD1Q68G75 181 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 TMEM61Q8N0U2 210 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 OR2G3Q8NGZ4 309 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 SCGB1C1Q8TD33 95 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 PSMG3Q9BT73 122 aaPredicted RBP7.43□□□□□ -1.22
CLN8-202ENST00000517514 SHANK2-AS3Q9BTD1 123 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 MCRIP2Q9BUT9 160 aaKnown RBP7.43□□□□□ -1.22
CLN8-202ENST00000517514 SLC25A39Q9BZJ4 359 aaPredicted RBP7.43□□□□□ -1.22
CLN8-202ENST00000517514 DNAJC4Q9NNZ3 241 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 HIGD1AQ9Y241 93 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 SMAD5-AS1Q9Y6J3 95 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
CLN8-202ENST00000517514 SORL1Q92673 2214 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 PFDN1O60925 122 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 EIF3GO75821 320 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLN8-202ENST00000517514 JTBO76095 146 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 OR5G3P0C626 314 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 INSL3P51460 131 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 RAB2AP61019 212 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 BEAN1Q3B7T3 259 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 FFAR4Q5NUL3 377 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 KPRPQ5T749 579 aaPredicted RBP7.42□□□□□ -1.22
CLN8-202ENST00000517514 PXDC1Q5TGL8 231 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 FAM167A-AS1Q96KT0 104 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 SLC25A32Q9H2D1 315 aa7.42□□□□□ -1.22
CLN8-202ENST00000517514 SEPSECSQ9HD40 501 aaKnown RBP7.42□□□□□ -1.22
CLN8-202ENST00000517514 TECRQ9NZ01 308 aaKnown RBP7.42□□□□□ -1.22
CLN8-202ENST00000517514 BORCS7-ASMTA0A0B4J1R7 106 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 KANTRA0A1W2PQU2 76 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 C17orf112F2Z3M2 114 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 COX7A2P2O60397 106 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 SPP1P10451 314 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 C10orf113Q5VZT2 155 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 MIR17HGQ75NE6 70 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 SSX7Q7RTT5 188 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 TCF24Q7RTU0 167 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 LINC00305Q7Z4B0 112 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 RPP25LQ8N5L8 163 aaKnown RBP7.41□□□□□ -1.22
CLN8-202ENST00000517514 ZNF709Q8N972 641 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 STOML3Q8TAV4 291 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 GATAD1Q8WUU5 269 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 ZNF503Q96F45 646 aa7.41□□□□□ -1.22
CLN8-202ENST00000517514 ZNF471Q9BX82 626 aaPredicted RBP7.41□□□□□ -1.22
CLN8-202ENST00000517514 DNAH9Q9NYC9 4486 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 ELOA3CA0A087WX78 387 aaPredicted RBP7.4□□□□□ -1.22
CLN8-202ENST00000517514 A0A1W2PS18 150 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 TSPAN4O14817 238 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 ZNF726P1Q15940 193 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 C1orf194Q5T5A4 169 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 Q6ZRG5 221 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 FAM24BQ8N5W8 94 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 OR1L4Q8NGR5 311 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 OR2K2Q8NGT1 345 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 DYNLRB2Q8TF09 96 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms