RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 TAS2R45P59539 299 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 PLP1P60201 277 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 CFHR3Q02985 330 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 CCDC28AQ8IWP9 274 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 Q8WTZ3 238 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 EEF1AKMT3Q96AZ1 226 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 RNF125Q96EQ8 232 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 TXN2Q99757 166 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 C20orf24Q9BUV8 137 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 PRSS22Q9GZN4 317 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 SMDT1Q9H4I9 107 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 ESM1Q9NQ30 184 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 MANBALQ9NQG1 85 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 CARHSP1Q9Y2V2 147 aaKnown RBP7.09□□□□□ -1.27
CPNE4-213ENST00000515418 NIPBLQ6KC79 2804 aaeCLIP7.09□□□□□ -1.27
CPNE4-213ENST00000515418 FAM74A7A6NL05 159 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 RAB9AP51151 201 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 PQLC2Q6ZP29 291 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 OR5B12Q96R08 314 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 RNF2Q99496 336 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 PAXXQ9BUH6 204 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 MRPL32Q9BYC8 188 aaKnown RBP7.09□□□□□ -1.27
CPNE4-213ENST00000515418 SLC25A39Q9BZJ4 359 aaPredicted RBP7.09□□□□□ -1.27
CPNE4-213ENST00000515418 OR51M1Q9H341 326 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 TRBV7-1A0A0A6YYK4 115 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 FAM181BA6NEQ2 426 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 DNAJC9-AS1A6NH13 148 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 FAM223BA6NKX1 122 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 FABP1P07148 127 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 AKR1C3P42330 323 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 ZNF674Q2M3X9 581 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 FAM90A2PQ658T7 463 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 FAM223AQ8IWN6 122 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 BLNKQ8WV28 456 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 RPUSD4Q96CM3 377 aaKnown RBP7.08□□□□□ -1.28
CPNE4-213ENST00000515418 NPFFR1Q9GZQ6 430 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 FN1P02751 2386 aaKnown RBP7.08□□□□□ -1.28
CPNE4-213ENST00000515418 TGOLN2O43493 480 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 ZNF207O43670 478 aaKnown RBP7.08□□□□□ -1.28
CPNE4-213ENST00000515418 OR2C1O95371 312 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 UBE2L3P68036 154 aaKnown RBP7.08□□□□□ -1.28
CPNE4-213ENST00000515418 TOMM20LQ6UXN7 152 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 SVBPQ8N300 66 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 TEX29Q8N6K0 151 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 FXYD5Q96DB9 178 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 DERL1Q9BUN8 251 aa7.08□□□□□ -1.28
CPNE4-213ENST00000515418 H3BQ15 152 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 NDUFB4O95168 129 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 IGHG4P01861 327 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 HNF1AP20823 631 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 PSMB8P28062 276 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 RANP62826 216 aaKnown RBP7.07□□□□□ -1.28
CPNE4-213ENST00000515418 SUMO1P63165 101 aaKnown RBP7.07□□□□□ -1.28
CPNE4-213ENST00000515418 BTN1A1Q13410 526 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 HIST2H2BDQ6DRA6 164 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 OR4X2Q8NGF9 303 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 C17orf77Q96MU5 243 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 SHANK2-AS3Q9BTD1 123 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 NKX6-2Q9C056 277 aaPredicted RBP7.07□□□□□ -1.28
CPNE4-213ENST00000515418 TMEM167BQ9NRX6 74 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 F8P00451 2351 aa7.07□□□□□ -1.28
CPNE4-213ENST00000515418 IGHV3OR16-13A0A075B7E8 117 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 IGHV3-49A0A0A0MS15 119 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 IGHV3-74A0A0B4J1X5 117 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 IGHV3-66A0A0C4DH42 116 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 SCO2A0A1W2PP80 73 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 ZNF98A6NK75 572 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 GGTLC3B5MD39 225 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 M0R036 132 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 RPLP1P05386 114 aaKnown RBP7.06□□□□□ -1.28
CPNE4-213ENST00000515418 NBEAP1P0C6P0 100 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 PRB4P10163 310 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-213ENST00000515418 ZNF600Q6ZNG1 722 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 CLRN3Q8NCR9 226 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 SUN5Q8TC36 379 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 SERTAD4Q9NUC0 356 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 ZNF727A8MUV8 499 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 H3BRN7 92 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 H3BUA1 57 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 SNAPINO95295 136 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 BRI3O95415 125 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 APOHP02749 345 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-213ENST00000515418 GP9P14770 177 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 SRD5A1P18405 259 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 ARL3P36405 182 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 RPL15P61313 204 aaKnown RBP7.06□□□□□ -1.28
CPNE4-213ENST00000515418 ZNF343Q6P1L6 599 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-213ENST00000515418 USMG5Q96IX5 58 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 SMIM7Q9BQ49 75 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 PARLQ9H300 379 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 ZFAND3Q9H8U3 227 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 AURKAIP1Q9NWT8 199 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-213ENST00000515418 ZNF586Q9NXT0 402 aa7.06□□□□□ -1.28
CPNE4-213ENST00000515418 WNK1Q9H4A3 2382 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 TEP1Q99973 2627 aaKnown RBP7.05□□□□□ -1.28
CPNE4-213ENST00000515418 JMJD1CQ15652 2540 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.05□□□□□ -1.28
CPNE4-213ENST00000515418 CLPSL1A2RUU4 121 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 TMEM250H0YL14 139 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms