RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 CA2P00918 260 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 RBP4P02753 201 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 MT-ND6P03923 174 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 ARL14EPLP0DKL9 152 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 CT45A6P0DMU7 189 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 CT45A5P0DMU8 189 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 CT45A7P0DMV0 189 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 PPIAL4FP0DN26 164 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 RNASE2P10153 161 aaKnown RBP2.94□□□□□ -1.94
CAST-242ENST00000515063 ESDP10768 282 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 IL3RAP26951 378 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 NBL1P41271 181 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 LGALS7P47929 136 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 TDGF1P3P51864 188 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 CNN1P51911 297 aaKnown RBP2.94□□□□□ -1.94
CAST-242ENST00000515063 SUB1P53999 127 aaKnown RBP eCLIP2.94□□□□□ -1.94
CAST-242ENST00000515063 TAS2R60P59551 318 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 SELENOTP62341 195 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 PAFAH1B2P68402 229 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 SRSF6Q13247 344 aaKnown RBP2.94□□□□□ -1.94
CAST-242ENST00000515063 LTC4SQ16873 150 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 HLA-DRB5Q30154 266 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 LRRC10Q5BKY1 277 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 MIC13Q5XKP0 118 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 PVRIGQ6DKI7 326 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 OR10D4PQ8NGN7 298 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 OR4C13Q8NGP0 309 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 ST6GALNAC6Q969X2 333 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 SMIM12Q96EX1 92 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 SFRP2Q96HF1 295 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 NOL4LQ96MY1 436 aaPredicted RBP2.94□□□□□ -1.94
CAST-242ENST00000515063 ZNF714Q96N38 554 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 HIST1H2BLQ99880 126 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 RNF5Q99942 180 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 NABP2Q9BQ15 211 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 CHRDL1Q9BU40 450 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 GPR61Q9BZJ8 451 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 PATZ1Q9HBE1 687 aaKnown RBP2.94□□□□□ -1.94
CAST-242ENST00000515063 OSTCQ9NRP0 149 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 NDUFA4L2Q9NRX3 87 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 IL36BQ9NZH7 164 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 ZMAT5Q9UDW3 170 aaKnown RBP2.94□□□□□ -1.94
CAST-242ENST00000515063 TP53TG5Q9Y2B4 290 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 PYGO1Q9Y3Y4 419 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 PPIAL4AQ9Y536 164 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 SELENOKQ9Y6D0 94 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 OTOGLQ3ZCN5 2332 aa2.94□□□□□ -1.94
CAST-242ENST00000515063 BDP1A6H8Y1 2624 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 XKRY2A2RUG3 117 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 PSMB11A5LHX3 300 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 DPRXA6NFQ7 191 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 TSTD3H0UI37 97 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 CORTO00230 105 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 NDUFB3O43676 98 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 TFF1P04155 84 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 SAA1P0DJI8 122 aaPredicted RBP2.93□□□□□ -1.94
CAST-242ENST00000515063 C8orf88P0DMB2 117 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 FABP4P15090 132 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 ATP5G3P48201 142 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 PLP1P60201 277 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 RPL31P62899 125 aaKnown RBP2.93□□□□□ -1.94
CAST-242ENST00000515063 RPL8P62917 257 aaKnown RBP2.93□□□□□ -1.94
CAST-242ENST00000515063 Q0VG73 95 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 VMA21Q3ZAQ7 101 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 FBXL19-AS1Q494R0 122 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 SPRNQ5BIV9 151 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 SPINK9Q5DT21 86 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 FAM78BQ5VT40 261 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 CYB5R2Q6BCY4 276 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 RASL11AQ6T310 242 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 FAM231DQ6ZW35 169 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 MRPL52Q86TS9 123 aaKnown RBP2.93□□□□□ -1.94
CAST-242ENST00000515063 DOLPP1Q86YN1 238 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 STXBP6Q8NFX7 210 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 OR4P4Q8NGL7 312 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 OR10X1Q8NGY0 326 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 OR9G1Q8NH87 305 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 SGMS2Q8NHU3 365 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 OCC1Q8TAD7 63 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 FLYWCH2Q96CP2 140 aaKnown RBP2.93□□□□□ -1.94
CAST-242ENST00000515063 CCL13Q99616 98 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 GNB1LQ9BYB4 327 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 COMMD5Q9GZQ3 224 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 WASHC3Q9Y3C0 194 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 TRAPPC1Q9Y5R8 145 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 WDFY3Q8IZQ1 3526 aa2.93□□□□□ -1.94
CAST-242ENST00000515063 TCRBV4S1A1TA0A5B7 111 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 HELTA6NFD8 242 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 SRRM4A7MD48 611 aaKnown RBP2.92□□□□□ -1.94
CAST-242ENST00000515063 ISLRO14498 428 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 REG1AP05451 166 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 CRYGCP07315 174 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 OR4A8P0C604 315 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 GZMBP10144 247 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 OR10J1P30954 320 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 PPOXP50336 477 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 PRRX1P54821 245 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 DLX6P56179 175 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 UBE2G2P60604 165 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 RANP62826 216 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms