RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 RHPN1-AS1Q9BWJ2 59 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 GGTLC1Q9BX51 225 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 CDIP1Q9H305 208 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 WFDC1Q9HC57 220 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 NPVFQ9HCQ7 196 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 SIGLEC8Q9NYZ4 499 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 MRPL27Q9P0M9 148 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 SMPXQ9UHP9 88 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 WDR83OSQ9Y284 106 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 LSM4Q9Y4Z0 139 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 HUWE1Q7Z6Z7 4374 aaKnown RBP7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 RNF222A6NCQ9 220 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 FNDC10F2Z333 226 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 LINC00869P0C866 280 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 GP9P14770 177 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 ORM2P19652 201 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 S100A11P31949 105 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 TFPI2P48307 235 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 AP2S1P53680 142 aaPredicted RBP7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 RPL11P62913 178 aaKnown RBP7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 VWC2Q2TAL6 325 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 MIC13Q5XKP0 118 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 TEPPQ6URK8 271 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 STPG3Q8N7X2 389 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 OR1B1Q8NGR6 318 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 MARC2Q969Z3 335 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 GGACTQ9BVM4 153 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 FBXL17Q9UF56 701 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 RABAC1Q9UI14 185 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 ZNF256Q9Y2P7 627 aaPredicted RBP7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 RFNGQ9Y644 331 aa7.38□□□□□ -1.23
TOPBP1-209ENST00000513818 ARPC5O15511 151 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 DFFBO76075 338 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 FABP1P07148 127 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 NPPCP23582 126 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 CRYBB3P26998 211 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 CAMLGP49069 296 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 CD300CQ08708 224 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 FGL1Q08830 312 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 OPCMLQ14982 345 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 LEMD1Q68G75 181 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 LCN12Q6JVE5 192 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 TCF24Q7RTU0 167 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 ZNF546Q86UE3 836 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 GBGT1Q8N5D6 347 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 ASB13Q8WXK3 278 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 PPP1R14BQ96C90 147 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 AQP10Q96PS8 301 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 UHRF2Q96PU4 802 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 ATP5SQ99766 215 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 SCRT1Q9BWW7 348 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 WFDC10AQ9H1F0 79 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 SLC45A2Q9UMX9 530 aa7.37□□□□□ -1.23
TOPBP1-209ENST00000513818 K7EIL1 84 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 OR5G3P0C626 314 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 EIF2B2P49770 351 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 ATP6V1FQ16864 119 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 RBPMS2Q6ZRY4 209 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 WFDC3Q8IUB2 231 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 OR11H4Q8NGC9 324 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 ST6GAL2Q96JF0 529 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 RSG1Q9BU20 258 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 NPCDR1Q9BY65 106 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 WDR61Q9GZS3 305 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 ARL6Q9H0F7 186 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 VSIRQ9H7M9 311 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 SLC25A22Q9H936 323 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 TECRQ9NZ01 308 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 TNFSF18Q9UNG2 199 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 PXMP4Q9Y6I8 212 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 U3KQE9 123 aa7.36□□□□□ -1.23
TOPBP1-209ENST00000513818 ZNF785A8K8V0 405 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 CD7P09564 240 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 NUP62P37198 522 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 CD81P60033 236 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 GCSAMLQ5JQS6 135 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 MORN5Q5VZ52 161 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 FAM90A2PQ658T7 463 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 PATE2Q6UY27 113 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 FAM24BQ8N5W8 94 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 INO80EQ8NBZ0 244 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 STXBP6Q8NFX7 210 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 GLMPQ8WWB7 406 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 NARS2Q96I59 477 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 UBQLN2Q9UHD9 624 aa7.35□□□□□ -1.23
TOPBP1-209ENST00000513818 A0A1W2PS18 150 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 H3BRN7 92 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 BUB3O43684 328 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 COX7A2P2O60397 106 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 HYPMO75409 117 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 EIF3GO75821 320 aaKnown RBP eCLIP7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 B2MP61769 119 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 SELENOTP62341 195 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 AKAP14Q86UN6 197 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 OR2K2Q8NGT1 345 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 MRAPQ8TCY5 172 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 GRAMD2BQ96HH9 432 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 ARV1Q9H2C2 271 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 SLC25A32Q9H2D1 315 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 TMEM231Q9H6L2 316 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms