RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CHD7Q9P2D1 2997 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 DNAH17Q9UFH2 4485 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 TCRBV4S1A1TA0A5B7 111 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 FABP12A6NFH5 140 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 DPRXA6NFQ7 191 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 ZNF879B4DU55 563 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 F8W1H4 67 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 BUB1B-PAK6H3BSN5 160 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 GADD45GO95257 159 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 S100A4P26447 101 aaKnown RBP-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 FOXA3P55318 350 aaPredicted RBP-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 CDC42P60953 191 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 RHOBP62745 196 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 CLVS2Q5SYC1 327 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 AADACL4Q5VUY2 407 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 TRAPPC6BQ86SZ2 158 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 TEN1Q86WV5 123 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 SYCE1Q8N0S2 351 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 ATOH7Q8N100 152 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 Q8N402 240 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 OR52R1Q8NGF1 315 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 OR13C4Q8NGS5 318 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 OR2T35Q8NGX2 323 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 H1FXQ92522 213 aaKnown RBP-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 LINC00052Q96N35 136 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 C11orf68Q9H3H3 251 aaKnown RBP-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 C14orf132Q9NPU4 83 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 FBXL12Q9NXK8 326 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 C3orf18Q9UK00 162 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 SMG1Q96Q15 3661 aaKnown RBP-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 ZZEF1O43149 2961 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 CRYBG3Q68DQ2 2970 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 PIEZO2Q9H5I5 2752 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 MGAQ8IWI9 3026 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 SPEGQ15772 3267 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 ECM29Q5VYK3 1845 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 APC2O95996 2303 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 PIK3R4Q99570 1358 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 DOCK5Q9H7D0 1870 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 PHRF1Q9P1Y6 1649 aaKnown RBP-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 CELSR2Q9HCU4 2923 aa-0.2□□□□□ -2.44
PDGFC-208ENST00000512711 LOC400499M0QZD8 3231 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 DCCP43146 1447 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 SCN8AQ9UQD0 1980 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 BOD1L1Q8NFC6 3051 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 EYSQ5T1H1 3165 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 C2CD3Q4AC94 2353 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 A0A1B0GV50 99 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 ERICH2A1L162 156 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 TMEM213A2RRL7 107 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 ZNF727A8MUV8 499 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 C1orf196B1AJZ1 125 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 GOLGA8KD6RF30 607 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 IFNA10P01566 189 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 OR4E1P0C645 316 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 RPS12P25398 132 aaKnown RBP-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 NAA20P61599 178 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 SPATA45Q537H7 98 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 HIST2H3PS2Q5TEC6 136 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 LPCAT3Q6P1A2 487 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 C2orf82Q6UX34 121 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 ANKRD29Q8N6D5 301 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 OR8D4Q8NGM9 314 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 PLAC4Q8WY50 150 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 TOMM6Q96B49 74 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 UPF3BQ9BZI7 483 aaKnown RBP-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 OR52A5Q9H2C5 316 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 OR51I1Q9H343 314 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 BCL2L10Q9HD36 194 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 PLEKHJ1Q9NW61 149 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 UBAP1Q9NZ09 502 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 SVEP1Q4LDE5 3571 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 CENPEQ02224 2701 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 EVC2Q86UK5 1308 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 PCNTO95613 3336 aa-0.21□□□□□ -2.44
PDGFC-208ENST00000512711 CFAP54Q96N23 3096 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 DNAH10Q8IVF4 4471 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 VPS13CQ709C8 3753 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 TRIOO75962 3097 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 EXOC1LA0A1B0GW35 172 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 C7orf71A4D174 169 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 EEF1E1-BLOC1S5C9J1V9 151 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 YKT6O15498 198 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 CRYZL1O95825 349 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 DHFRP00374 187 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 PPYP01298 95 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 HLA-DRB1P01911 266 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 APOEP02649 317 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 ISG15P05161 165 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 CD14P08571 375 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 OCMP0CE72 109 aaPredicted RBP-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 MYL12AP19105 171 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 ANP32AP39687 249 aaKnown RBP-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 NKX2-5P52952 324 aaPredicted RBP-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 TCL1AP56279 114 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 UBE2G2P60604 165 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 MLLT11Q13015 90 aaPredicted RBP-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 PMAIP1Q13794 54 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 Q5BKY6 102 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms