RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 DOPEY1Q5JWR5 2465 aa11.16□□□□□ -0.62
SNCAIP-217ENST00000512385 LEPROTL1O95214 131 aa11.16□□□□□ -0.62
SNCAIP-217ENST00000512385 GOSR1O95249 250 aa11.16□□□□□ -0.62
SNCAIP-217ENST00000512385 C8orf88P0DMB2 117 aa11.16□□□□□ -0.62
SNCAIP-217ENST00000512385 SMIM15Q7Z3B0 74 aa11.16□□□□□ -0.62
SNCAIP-217ENST00000512385 BLNKQ8WV28 456 aa11.16□□□□□ -0.62
SNCAIP-217ENST00000512385 PGLYRP4Q96LB8 373 aa11.16□□□□□ -0.62
SNCAIP-217ENST00000512385 FNDC4Q9H6D8 234 aaPredicted RBP11.16□□□□□ -0.62
SNCAIP-217ENST00000512385 TMEM14BQ9NUH8 114 aa11.16□□□□□ -0.62
SNCAIP-217ENST00000512385 ADH4P08319 380 aa11.15□□□□□ -0.62
SNCAIP-217ENST00000512385 COX19Q49B96 90 aa11.15□□□□□ -0.62
SNCAIP-217ENST00000512385 MBNL2Q5VZF2 373 aaKnown RBP11.15□□□□□ -0.62
SNCAIP-217ENST00000512385 MOGAT3Q86VF5 341 aa11.15□□□□□ -0.62
SNCAIP-217ENST00000512385 ITLN1Q8WWA0 313 aa11.15□□□□□ -0.62
SNCAIP-217ENST00000512385 DDB2Q92466 427 aa11.15□□□□□ -0.62
SNCAIP-217ENST00000512385 E7EUB6 86 aa11.15□□□□□ -0.63
SNCAIP-217ENST00000512385 KLF5Q13887 457 aaPredicted RBP11.15□□□□□ -0.63
SNCAIP-217ENST00000512385 ADIPOQQ15848 244 aa11.15□□□□□ -0.63
SNCAIP-217ENST00000512385 TMEM116Q8NCL8 245 aa11.15□□□□□ -0.63
SNCAIP-217ENST00000512385 DEFB108BQ8NET1 73 aa11.15□□□□□ -0.63
SNCAIP-217ENST00000512385 A0A1W2PRE2 83 aa11.14□□□□□ -0.63
SNCAIP-217ENST00000512385 GTSF1Q8WW33 167 aa11.14□□□□□ -0.63
SNCAIP-217ENST00000512385 TMEM238C9JI98 176 aa11.14□□□□□ -0.63
SNCAIP-217ENST00000512385 WIPF2Q8TF74 440 aaPredicted RBP11.14□□□□□ -0.63
SNCAIP-217ENST00000512385 GRAMD2BQ96HH9 432 aa11.14□□□□□ -0.63
SNCAIP-217ENST00000512385 SHISA9B4DS77 424 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 E7EQL1 145 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 C19orf84I3L1E1 186 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 LY6HO94772 140 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 TOX4O94842 621 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 SMIM21Q3B7S5 101 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 RUSC1-AS1Q66K80 236 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 ZNF329Q86UD4 541 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 FAM169BQ8N8A8 192 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 OR4S2Q8NH73 311 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 COMMD5Q9GZQ3 224 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 ST20Q9HBF5 79 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 J3QW42 95 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 PEX7O00628 323 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 SCRT2Q9NQ03 307 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 ABCA12Q86UK0 2595 aa11.13□□□□□ -0.63
SNCAIP-217ENST00000512385 FAM231BA6NCW3 169 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 FAM90A9PA6NNJ1 464 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 NCR2O95944 276 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 IGHV1-46P01743 117 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 TAS2R45P59539 299 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 PATE2Q6UY27 113 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 FOXA2Q9Y261 457 aaPredicted RBP11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 FBN2P35556 2912 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 C7orf71A4D174 169 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 LYNX1G3V0Z9 82 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 OR2J3O76001 311 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 APOA2P02652 100 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 LYNX1P0DP58 116 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 C10orf55Q5SWW7 151 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 CHRDL1Q9BU40 450 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 CXXC4Q9H2H0 198 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 TENM4Q6N022 2769 aa11.12□□□□□ -0.63
SNCAIP-217ENST00000512385 IGLV3-9A0A075B6K5 115 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 TEX50A0A1B0GTY4 177 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 A0A1B0GXF2 115 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 FXYD7P58549 80 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 PAXXQ9BUH6 204 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 TMUB1Q9BVT8 246 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 C7orf69Q9H7B7 122 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 CALYQ9NYX4 217 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 TRAV8-1A0A0A6YYK1 113 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 A0A1W2PPR1 153 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 PSMB11A5LHX3 300 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 TMEM8BA6NDV4 472 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 CRXO43186 299 aaPredicted RBP11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 MOSP00540 346 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 GCSAMQ8N6F7 178 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 JMJD8Q96S16 334 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 JPT1Q9UK76 154 aa11.11□□□□□ -0.63
SNCAIP-217ENST00000512385 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 HSBP1L1C9JCN9 74 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 APELAP0DMC3 54 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 HBBP68871 147 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 RNASE6Q93091 150 aaKnown RBP11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 IGHV3-21A0A0B4J1V1 117 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 IGLC1P0CG04 106 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 FAM106CPP0CH98 169 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 GPR183P32249 361 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 TNFAIP6P98066 277 aaPredicted RBP11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 FAM106AQ4KMX7 169 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 C12orf54Q6X4T0 127 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 NPIPB3Q92617 1050 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 RAB37Q96AX2 223 aa11.1□□□□□ -0.63
SNCAIP-217ENST00000512385 SLC25A5P05141 298 aaKnown RBP11.09□□□□□ -0.63
SNCAIP-217ENST00000512385 RNASE2P10153 161 aaKnown RBP11.09□□□□□ -0.63
SNCAIP-217ENST00000512385 REG1BP48304 166 aa11.09□□□□□ -0.63
SNCAIP-217ENST00000512385 ARF6P62330 175 aa11.09□□□□□ -0.63
SNCAIP-217ENST00000512385 C17orf58Q2M2W7 97 aa11.09□□□□□ -0.63
SNCAIP-217ENST00000512385 CLEC2AQ6UVW9 174 aa11.09□□□□□ -0.63
SNCAIP-217ENST00000512385 OR1B1Q8NGR6 318 aa11.09□□□□□ -0.63
SNCAIP-217ENST00000512385 CORO2AQ92828 525 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms