RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 C12orf45Q8N5I9 185 aaPredicted RBP12.05□□□□□ -0.48
DDX41-213ENST00000512027 RAB40CQ96S21 281 aa12.05□□□□□ -0.48
DDX41-213ENST00000512027 RARRES2Q99969 163 aa12.05□□□□□ -0.48
DDX41-213ENST00000512027 SLC25A22Q9H936 323 aa12.05□□□□□ -0.48
DDX41-213ENST00000512027 DOK5Q9P104 306 aa12.05□□□□□ -0.48
DDX41-213ENST00000512027 LSM5Q9Y4Y9 91 aaKnown RBP12.05□□□□□ -0.48
DDX41-213ENST00000512027 DNAH1Q9P2D7 4330 aa12.05□□□□□ -0.48
DDX41-213ENST00000512027 LCE6AA0A183 80 aa12.04□□□□□ -0.48
DDX41-213ENST00000512027 C7orf66A4D0T2 115 aa12.04□□□□□ -0.48
DDX41-213ENST00000512027 ORM2P19652 201 aa12.04□□□□□ -0.48
DDX41-213ENST00000512027 NUP62P37198 522 aaPredicted RBP12.04□□□□□ -0.48
DDX41-213ENST00000512027 ARL16Q0P5N6 197 aa12.04□□□□□ -0.48
DDX41-213ENST00000512027 TMEM144Q7Z5S9 345 aa12.04□□□□□ -0.48
DDX41-213ENST00000512027 BPIFCQ8NFQ6 507 aa12.04□□□□□ -0.48
DDX41-213ENST00000512027 OR11H2Q8NH07 326 aa12.04□□□□□ -0.48
DDX41-213ENST00000512027 C5orf51A6NDU8 294 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 DEFB4AO15263 64 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 UPK1BO75841 260 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 ZNF846Q147U1 533 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 GDF5OSQ5U4N7 250 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 MZT2BQ6NZ67 158 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 CYP2G1PQ6ZSU1 146 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 OR8I2Q8N0Y5 310 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 OR1B1Q8NGR6 318 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 GATAD1Q8WUU5 269 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 SLC25A32Q9H2D1 315 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 CLEC5AQ9NY25 188 aa12.03□□□□□ -0.48
DDX41-213ENST00000512027 CXorf65A6NEN9 183 aa12.02□□□□□ -0.49
DDX41-213ENST00000512027 K7EPK0 472 aa12.02□□□□□ -0.49
DDX41-213ENST00000512027 SOCS3O14543 225 aa12.02□□□□□ -0.49
DDX41-213ENST00000512027 TSC22D2O75157 780 aa12.02□□□□□ -0.49
DDX41-213ENST00000512027 SNRPD3P62318 126 aaKnown RBP12.02□□□□□ -0.49
DDX41-213ENST00000512027 DLK1P80370 383 aa12.02□□□□□ -0.49
DDX41-213ENST00000512027 C17orf77Q96MU5 243 aa12.02□□□□□ -0.49
DDX41-213ENST00000512027 LINC00052Q96N35 136 aa12.02□□□□□ -0.49
DDX41-213ENST00000512027 SCRT1Q9BWW7 348 aa12.02□□□□□ -0.49
DDX41-213ENST00000512027 PFDN2Q9UHV9 154 aa12.02□□□□□ -0.49
DDX41-213ENST00000512027 ZNF98A6NK75 572 aa12.01□□□□□ -0.49
DDX41-213ENST00000512027 IL5P05113 134 aa12.01□□□□□ -0.49
DDX41-213ENST00000512027 TAS2R30P59541 319 aa12.01□□□□□ -0.49
DDX41-213ENST00000512027 SLC38A11Q08AI6 406 aa12.01□□□□□ -0.49
DDX41-213ENST00000512027 C1orf194Q5T5A4 169 aa12.01□□□□□ -0.49
DDX41-213ENST00000512027 OR10P1Q8NGE3 313 aa12.01□□□□□ -0.49
DDX41-213ENST00000512027 ENKURQ8TC29 256 aa12.01□□□□□ -0.49
DDX41-213ENST00000512027 C11orf1Q9H5F2 150 aa12.01□□□□□ -0.49
DDX41-213ENST00000512027 FBXL17Q9UF56 701 aa12.01□□□□□ -0.49
DDX41-213ENST00000512027 L7N2F9 121 aa12□□□□□ -0.49
DDX41-213ENST00000512027 IGKV3-20P01619 116 aa12□□□□□ -0.49
DDX41-213ENST00000512027 LINC00869P0C866 280 aa12□□□□□ -0.49
DDX41-213ENST00000512027 SPP1P10451 314 aa12□□□□□ -0.49
DDX41-213ENST00000512027 S100A10P60903 97 aa12□□□□□ -0.49
DDX41-213ENST00000512027 VAMP2P63027 116 aa12□□□□□ -0.49
DDX41-213ENST00000512027 C2orf50Q96LR7 162 aa12□□□□□ -0.49
DDX41-213ENST00000512027 UHRF2Q96PU4 802 aa12□□□□□ -0.49
DDX41-213ENST00000512027 TMEM147Q9BVK8 224 aa12□□□□□ -0.49
DDX41-213ENST00000512027 MGAT4CQ9UBM8 478 aa12□□□□□ -0.49
DDX41-213ENST00000512027 FAM24AA6NFZ4 105 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 F6UB75 175 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 H3BMM0 161 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 H3BRN7 92 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 CFDP00746 253 aaPredicted RBP11.99□□□□□ -0.49
DDX41-213ENST00000512027 BCAP31P51572 246 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 CAV2P51636 162 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 MORN3Q6PF18 240 aaPredicted RBP11.99□□□□□ -0.49
DDX41-213ENST00000512027 NRARPQ7Z6K4 114 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 C20orf173Q96LM9 149 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 RSG1Q9BU20 258 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 NPVFQ9HCQ7 196 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 SEPSECSQ9HD40 501 aaKnown RBP11.99□□□□□ -0.49
DDX41-213ENST00000512027 SLC45A2Q9UMX9 530 aa11.99□□□□□ -0.49
DDX41-213ENST00000512027 CST7O76096 145 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 SIX6O95475 246 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 OR5G3P0C626 314 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 HLA-DRB4P13762 266 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 PSMB3P49720 205 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 FXYD7P58549 80 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 NANOS2P60321 138 aaKnown RBP11.98□□□□□ -0.49
DDX41-213ENST00000512027 RAB32Q13637 225 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 IGFL4Q6B9Z1 124 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 SLC25A39Q9BZJ4 359 aaPredicted RBP11.98□□□□□ -0.49
DDX41-213ENST00000512027 HIGD1AQ9Y241 93 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 HLA-DRB4X5D2U9 266 aa11.98□□□□□ -0.49
DDX41-213ENST00000512027 IGHV4-28A0A0C4DH34 117 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 ID1P41134 155 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 GALR1P47211 349 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 IL15RAQ13261 267 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 TEPPQ6URK8 271 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 PATE2Q6UY27 113 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 Q8NAQ8 132 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 CSNK1G2-AS1Q8NCQ2 148 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 SHANK2-AS3Q9BTD1 123 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 ARL6Q9H0F7 186 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 C11orf68Q9H3H3 251 aaKnown RBP11.97□□□□□ -0.49
DDX41-213ENST00000512027 SAV1Q9H4B6 383 aaPredicted RBP11.97□□□□□ -0.49
DDX41-213ENST00000512027 XCL2Q9UBD3 114 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 X6R8D5 127 aa11.97□□□□□ -0.49
DDX41-213ENST00000512027 IGSF23A1L1A6 192 aa11.96□□□□□ -0.49
DDX41-213ENST00000512027 FNDC10F2Z333 226 aa11.96□□□□□ -0.49
DDX41-213ENST00000512027 AGPAT2O15120 278 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms