RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 FAM240BA0A1B0GVZ2 78 aa9.69□□□□□ -0.86
RNF4-215ENST00000511843 SNRPD3P62318 126 aaKnown RBP9.69□□□□□ -0.86
RNF4-215ENST00000511843 ARL16Q0P5N6 197 aa9.69□□□□□ -0.86
RNF4-215ENST00000511843 TMEM14EPQ6UXP3 125 aa9.69□□□□□ -0.86
RNF4-215ENST00000511843 OR1B1Q8NGR6 318 aa9.69□□□□□ -0.86
RNF4-215ENST00000511843 GATAD1Q8WUU5 269 aa9.69□□□□□ -0.86
RNF4-215ENST00000511843 LINC00052Q96N35 136 aa9.69□□□□□ -0.86
RNF4-215ENST00000511843 SLC25A32Q9H2D1 315 aa9.69□□□□□ -0.86
RNF4-215ENST00000511843 SLC25A22Q9H936 323 aa9.69□□□□□ -0.86
RNF4-215ENST00000511843 LSM5Q9Y4Y9 91 aaKnown RBP9.69□□□□□ -0.86
RNF4-215ENST00000511843 C7orf66A4D0T2 115 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 C5orf51A6NDU8 294 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 NUP62P37198 522 aaPredicted RBP9.68□□□□□ -0.86
RNF4-215ENST00000511843 IFITM3Q01628 133 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 ASAH1Q13510 395 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 ZNF846Q147U1 533 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 GDF5OSQ5U4N7 250 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 CYP2G1PQ6ZSU1 146 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 TMEM144Q7Z5S9 345 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 OR8I2Q8N0Y5 310 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 C12orf45Q8N5I9 185 aaPredicted RBP9.68□□□□□ -0.86
RNF4-215ENST00000511843 BPIFCQ8NFQ6 507 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 S100ZQ8WXG8 99 aa9.68□□□□□ -0.86
RNF4-215ENST00000511843 ZNF98A6NK75 572 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 K7EPK0 472 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 SOCS3O14543 225 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 UPK1BO75841 260 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 IGKV3-20P01619 116 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 SPP1P10451 314 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 DLK1P80370 383 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 SLC38A11Q08AI6 406 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 C1orf194Q5T5A4 169 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 MZT2BQ6NZ67 158 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 LINC00299Q6ZSB3 139 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 SCRT1Q9BWW7 348 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 PTTG2Q9NZH5 202 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 FBXL17Q9UF56 701 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 PFDN2Q9UHV9 154 aa9.67□□□□□ -0.86
RNF4-215ENST00000511843 PLECQ15149 4684 aaKnown RBP9.67□□□□□ -0.86
RNF4-215ENST00000511843 H3BMM0 161 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 TSC22D2O75157 780 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 IL5P05113 134 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 FXYD7P58549 80 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 TAS2R30P59541 319 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 NANOS2P60321 138 aaKnown RBP9.66□□□□□ -0.86
RNF4-215ENST00000511843 MORN3Q6PF18 240 aaPredicted RBP9.66□□□□□ -0.86
RNF4-215ENST00000511843 OR10P1Q8NGE3 313 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 C20orf173Q96LM9 149 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 C17orf77Q96MU5 243 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 UHRF2Q96PU4 802 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 TMEM147Q9BVK8 224 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 XCL2Q9UBD3 114 aa9.66□□□□□ -0.86
RNF4-215ENST00000511843 F6UB75 175 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 L7N2F9 121 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 CFDP00746 253 aaPredicted RBP9.65□□□□□ -0.86
RNF4-215ENST00000511843 LINC00869P0C866 280 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 RBMY1A1P0DJD3 496 aaKnown RBP9.65□□□□□ -0.86
RNF4-215ENST00000511843 RBMY1CP0DJD4 496 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 PSMB3P49720 205 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 S100A10P60903 97 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 VAMP2P63027 116 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 RBMY1FQ15415 496 aaKnown RBP9.65□□□□□ -0.86
RNF4-215ENST00000511843 Q8NAQ8 132 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 ENKURQ8TC29 256 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 C2orf50Q96LR7 162 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 RSG1Q9BU20 258 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 C11orf1Q9H5F2 150 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 MGAT4CQ9UBM8 478 aa9.65□□□□□ -0.86
RNF4-215ENST00000511843 IGHV4-28A0A0C4DH34 117 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 FAM24AA6NFZ4 105 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 H3BRN7 92 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 JTBO76095 146 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 CST7O76096 145 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 OR5G3P0C626 314 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 HLA-DRB4P13762 266 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 BCAP31P51572 246 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 CAV2P51636 162 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 IGFL4Q6B9Z1 124 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 CEMP1Q6PRD7 247 aaPredicted RBP9.64□□□□□ -0.87
RNF4-215ENST00000511843 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 TMEM217Q8N7C4 229 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 CSNK1G2-AS1Q8NCQ2 148 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 PHLDA1Q8WV24 401 aaPredicted RBP9.64□□□□□ -0.87
RNF4-215ENST00000511843 C16orf92Q96LL3 132 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 SLC25A39Q9BZJ4 359 aaPredicted RBP9.64□□□□□ -0.87
RNF4-215ENST00000511843 C11orf68Q9H3H3 251 aaKnown RBP9.64□□□□□ -0.87
RNF4-215ENST00000511843 NPVFQ9HCQ7 196 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 SEPSECSQ9HD40 501 aaKnown RBP9.64□□□□□ -0.87
RNF4-215ENST00000511843 HIGD1AQ9Y241 93 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 HLA-DRB4X5D2U9 266 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 X6R8D5 127 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
RNF4-215ENST00000511843 NUPR2A6NF83 97 aa9.63□□□□□ -0.87
RNF4-215ENST00000511843 ISLRO14498 428 aa9.63□□□□□ -0.87
RNF4-215ENST00000511843 HYPMO75409 117 aa9.63□□□□□ -0.87
RNF4-215ENST00000511843 SIX6O95475 246 aa9.63□□□□□ -0.87
RNF4-215ENST00000511843 PRB4P10163 310 aaPredicted RBP9.63□□□□□ -0.87
RNF4-215ENST00000511843 ATF4P18848 351 aaPredicted RBP9.63□□□□□ -0.87
RNF4-215ENST00000511843 ID1P41134 155 aa9.63□□□□□ -0.87
RNF4-215ENST00000511843 GALR1P47211 349 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms