RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 OR10P1Q8NGE3 313 aa11.83□□□□□ -0.52
PDLIM5-216ENST00000511767 TENM2Q9NT68 2774 aa11.83□□□□□ -0.52
PDLIM5-216ENST00000511767 KNCNA6PVL3 124 aa11.82□□□□□ -0.52
PDLIM5-216ENST00000511767 GIG44P09565 113 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-216ENST00000511767 NUP62P37198 522 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-216ENST00000511767 AKR1C1Q04828 323 aa11.82□□□□□ -0.52
PDLIM5-216ENST00000511767 BPIFCQ8NFQ6 507 aa11.82□□□□□ -0.52
PDLIM5-216ENST00000511767 ENKURQ8TC29 256 aa11.82□□□□□ -0.52
PDLIM5-216ENST00000511767 SLC45A2Q9UMX9 530 aa11.82□□□□□ -0.52
PDLIM5-216ENST00000511767 DYNC2H1Q8NCM8 4307 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-216ENST00000511767 ZNF98A6NK75 572 aa11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 ORM2P19652 201 aa11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 RRAS2P62070 204 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 GSG1LQ6UXU4 331 aa11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 CYP2G1PQ6ZSU1 146 aa11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 TRPT1Q86TN4 253 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 STHQ8IWL8 128 aa11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 OR8I2Q8N0Y5 310 aa11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 IL17DQ8TAD2 202 aa11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 C17orf77Q96MU5 243 aa11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 GGACTQ9BVM4 153 aa11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 FBXL17Q9UF56 701 aa11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 LSM5Q9Y4Y9 91 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-216ENST00000511767 SMCO3A2RU48 225 aa11.8□□□□□ -0.52
PDLIM5-216ENST00000511767 FAM24AA6NFZ4 105 aa11.8□□□□□ -0.52
PDLIM5-216ENST00000511767 INMT-MINDY4F8WBC2 141 aa11.8□□□□□ -0.52
PDLIM5-216ENST00000511767 PLP1P60201 277 aa11.8□□□□□ -0.52
PDLIM5-216ENST00000511767 PSMG4Q5JS54 123 aa11.8□□□□□ -0.52
PDLIM5-216ENST00000511767 ACTL10Q5JWF8 245 aa11.8□□□□□ -0.52
PDLIM5-216ENST00000511767 GATAD1Q8WUU5 269 aa11.8□□□□□ -0.52
PDLIM5-216ENST00000511767 PPP1R14BQ96C90 147 aa11.8□□□□□ -0.52
PDLIM5-216ENST00000511767 MARVELD1Q9BSK0 173 aa11.8□□□□□ -0.52
PDLIM5-216ENST00000511767 A0A0J9YWU9 116 aa11.79□□□□□ -0.52
PDLIM5-216ENST00000511767 L7N2F9 121 aa11.79□□□□□ -0.52
PDLIM5-216ENST00000511767 SOCS3O14543 225 aa11.79□□□□□ -0.52
PDLIM5-216ENST00000511767 SNRPD3P62318 126 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-216ENST00000511767 SELENOTP62341 195 aa11.79□□□□□ -0.52
PDLIM5-216ENST00000511767 VAMP2P63027 116 aa11.79□□□□□ -0.52
PDLIM5-216ENST00000511767 EWSR1Q01844 656 aaKnown RBP eCLIP11.79□□□□□ -0.52
PDLIM5-216ENST00000511767 GPN1Q9HCN4 374 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-216ENST00000511767 SACSQ9NZJ4 4579 aa11.79□□□□□ -0.52
PDLIM5-216ENST00000511767 HYPMO75409 117 aa11.78□□□□□ -0.52
PDLIM5-216ENST00000511767 RAB32Q13637 225 aa11.78□□□□□ -0.52
PDLIM5-216ENST00000511767 MORN3Q6PF18 240 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-216ENST00000511767 TEPPQ6URK8 271 aa11.78□□□□□ -0.52
PDLIM5-216ENST00000511767 PATE2Q6UY27 113 aa11.78□□□□□ -0.52
PDLIM5-216ENST00000511767 OR1B1Q8NGR6 318 aa11.78□□□□□ -0.52
PDLIM5-216ENST00000511767 RARRES2Q99969 163 aa11.78□□□□□ -0.52
PDLIM5-216ENST00000511767 RSG1Q9BU20 258 aa11.78□□□□□ -0.52
PDLIM5-216ENST00000511767 MGAT4CQ9UBM8 478 aa11.78□□□□□ -0.52
PDLIM5-216ENST00000511767 PLECQ15149 4684 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-216ENST00000511767 H3BMM0 161 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 PRAF2O60831 178 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 CST7O76096 145 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 SIX6O95475 246 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 CA1P00915 261 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 ID1P41134 155 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 BCAP31P51572 246 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 TMEM252Q8N6L7 170 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 OR11H2Q8NH07 326 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 SHANK2-AS3Q9BTD1 123 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 TMEM147Q9BVK8 224 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 SLC25A39Q9BZJ4 359 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 SLC25A32Q9H2D1 315 aa11.77□□□□□ -0.53
PDLIM5-216ENST00000511767 LINC00869P0C866 280 aa11.76□□□□□ -0.53
PDLIM5-216ENST00000511767 SPP1P10451 314 aa11.76□□□□□ -0.53
PDLIM5-216ENST00000511767 ATF4P18848 351 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-216ENST00000511767 PVALBP20472 110 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-216ENST00000511767 CAV2P51636 162 aa11.76□□□□□ -0.53
PDLIM5-216ENST00000511767 DEFB1P60022 68 aa11.76□□□□□ -0.53
PDLIM5-216ENST00000511767 CSNK1G2-AS1Q8NCQ2 148 aa11.76□□□□□ -0.53
PDLIM5-216ENST00000511767 LINC00052Q96N35 136 aa11.76□□□□□ -0.53
PDLIM5-216ENST00000511767 SLC25A22Q9H936 323 aa11.76□□□□□ -0.53
PDLIM5-216ENST00000511767 DOK5Q9P104 306 aa11.76□□□□□ -0.53
PDLIM5-216ENST00000511767 AGPAT2O15120 278 aa11.75□□□□□ -0.53
PDLIM5-216ENST00000511767 S100A7P31151 101 aa11.75□□□□□ -0.53
PDLIM5-216ENST00000511767 GALR1P47211 349 aa11.75□□□□□ -0.53
PDLIM5-216ENST00000511767 PSMB3P49720 205 aa11.75□□□□□ -0.53
PDLIM5-216ENST00000511767 DEFA1P59665 94 aa11.75□□□□□ -0.53
PDLIM5-216ENST00000511767 DEFA3P59666 94 aa11.75□□□□□ -0.53
PDLIM5-216ENST00000511767 SLC38A11Q08AI6 406 aa11.75□□□□□ -0.53
PDLIM5-216ENST00000511767 ARL6Q9H0F7 186 aa11.75□□□□□ -0.53
PDLIM5-216ENST00000511767 LYRM2Q9NU23 88 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-216ENST00000511767 HIGD1AQ9Y241 93 aa11.75□□□□□ -0.53
PDLIM5-216ENST00000511767 IGSF23A1L1A6 192 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 H3BRN7 92 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 ISLRO14498 428 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 GOSR2O14653 212 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 OR5G3P0C626 314 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 S100A11P31949 105 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 SULT1A1P50225 295 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 S100A10P60903 97 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 RAP2BP61225 183 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 VWC2Q2TAL6 325 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 TMEM41BQ5BJD5 291 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 GDF5OSQ5U4N7 250 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 TMEM217Q8N7C4 229 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 GPR82Q96P67 336 aa11.74□□□□□ -0.53
PDLIM5-216ENST00000511767 MGST2Q99735 147 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms