RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 SIGLEC15Q6ZMC9 328 aa8.65□□□□□ -1.02
HMGXB3-203ENST00000510472 Q6ZWC4 215 aa8.65□□□□□ -1.02
HMGXB3-203ENST00000510472 TMEM252Q8N6L7 170 aa8.65□□□□□ -1.02
HMGXB3-203ENST00000510472 BPIFCQ8NFQ6 507 aa8.65□□□□□ -1.02
HMGXB3-203ENST00000510472 STXBP6Q8NFX7 210 aa8.65□□□□□ -1.02
HMGXB3-203ENST00000510472 NMES1Q9C002 83 aa8.65□□□□□ -1.02
HMGXB3-203ENST00000510472 NRN1Q9NPD7 142 aa8.65□□□□□ -1.02
HMGXB3-203ENST00000510472 PFDN2Q9UHV9 154 aa8.65□□□□□ -1.02
HMGXB3-203ENST00000510472 DNAH7Q8WXX0 4024 aa8.64□□□□□ -1.03
HMGXB3-203ENST00000510472 H0YIZ8 118 aa8.64□□□□□ -1.03
HMGXB3-203ENST00000510472 GOSR2O14653 212 aa8.64□□□□□ -1.03
HMGXB3-203ENST00000510472 CAV2P51636 162 aa8.64□□□□□ -1.03
HMGXB3-203ENST00000510472 APOC4P55056 127 aa8.64□□□□□ -1.03
HMGXB3-203ENST00000510472 SELENOTP62341 195 aa8.64□□□□□ -1.03
HMGXB3-203ENST00000510472 VWC2Q2TAL6 325 aa8.64□□□□□ -1.03
HMGXB3-203ENST00000510472 LEMD1Q68G75 181 aa8.64□□□□□ -1.03
HMGXB3-203ENST00000510472 TEPPQ6URK8 271 aa8.64□□□□□ -1.03
HMGXB3-203ENST00000510472 TP53TG1Q9Y2A0 90 aa8.64□□□□□ -1.03
HMGXB3-203ENST00000510472 IGSF23A1L1A6 192 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 SMCO3A2RU48 225 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 ZNF98A6NK75 572 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 SOCS3O14543 225 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 CST7O76096 145 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 PTTG1O95997 202 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 GIG44P09565 113 aaPredicted RBP8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 ZNF688P0C7X2 276 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 RPL35AP18077 110 aaKnown RBP8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 ORM2P19652 201 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 PVALBP20472 110 aaPredicted RBP8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 SULT1A1P50225 295 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 BCAP31P51572 246 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 CYCSP99999 105 aaKnown RBP8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 SLC38A11Q08AI6 406 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 PATE2Q6UY27 113 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 CHAC2Q8WUX2 184 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 RNF126Q9BV68 326 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 CSTL1Q9H114 145 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 MGAT4CQ9UBM8 478 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 FBXL17Q9UF56 701 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 WDR83OSQ9Y284 106 aa8.63□□□□□ -1.03
HMGXB3-203ENST00000510472 AGPAT2O15120 278 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 LINC00869P0C866 280 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 S100A11P31949 105 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 S100A10P60903 97 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 TRPT1Q86TN4 253 aaKnown RBP8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 OR8I2Q8N0Y5 310 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 TMEM217Q8N7C4 229 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 OR1B1Q8NGR6 318 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 MUC7Q8TAX7 377 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 RNF183Q96D59 192 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 MGST2Q99735 147 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 SHANK2-AS3Q9BTD1 123 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 SLC25A39Q9BZJ4 359 aaPredicted RBP8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 SLC25A32Q9H2D1 315 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 OR5AC2Q9NZP5 309 aa8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 KMT2CQ8NEZ4 4911 aaKnown RBP8.62□□□□□ -1.03
HMGXB3-203ENST00000510472 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
HMGXB3-203ENST00000510472 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
HMGXB3-203ENST00000510472 H3BRN7 92 aa8.61□□□□□ -1.03
HMGXB3-203ENST00000510472 SPRY2O43597 315 aa8.61□□□□□ -1.03
HMGXB3-203ENST00000510472 HYPMO75409 117 aa8.61□□□□□ -1.03
HMGXB3-203ENST00000510472 ATP6V1FQ16864 119 aa8.61□□□□□ -1.03
HMGXB3-203ENST00000510472 PXDC1Q5TGL8 231 aa8.61□□□□□ -1.03
HMGXB3-203ENST00000510472 TMEM147Q9BVK8 224 aa8.61□□□□□ -1.03
HMGXB3-203ENST00000510472 UQCC1Q9NVA1 299 aa8.61□□□□□ -1.03
HMGXB3-203ENST00000510472 E5RGE8 158 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 RLN2P04090 185 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 SNRPD3P62318 126 aaKnown RBP8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 PRR20EP86478 221 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 PRR20CP86479 221 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 PRR20DP86480 221 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 PRR20BP86481 221 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 PRR20AP86496 221 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 NHLH2Q02577 135 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 PSMG4Q5JS54 123 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 ZNF546Q86UE3 836 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 PPP1R1CQ8WVI7 109 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 PPP1R14BQ96C90 147 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 GPR82Q96P67 336 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 SCRT1Q9BWW7 348 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 DOK5Q9P104 306 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 HIGD1AQ9Y241 93 aa8.6□□□□□ -1.03
HMGXB3-203ENST00000510472 H3BMM0 161 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 ISLRO14498 428 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 MRPS12O15235 138 aaKnown RBP8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 SSNA1O43805 119 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 MPC2O95563 127 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 S100A7P31151 101 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 PSMB3P49720 205 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 RAP2BP61225 183 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 HBG1P69891 147 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 HBG2P69892 147 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 EWSR1Q01844 656 aaKnown RBP eCLIP8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 DEFB135Q30KP9 77 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 STX12Q86Y82 276 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 STHQ8IWL8 128 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 TMEM37Q8WXS4 190 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 UHRF2Q96PU4 802 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 RSG1Q9BU20 258 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms