RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 C11orf68Q9H3H3 251 aaKnown RBP13.53□□□□□ -0.24
LSM6-206ENST00000510331 PFDN2Q9UHV9 154 aa13.53□□□□□ -0.24
LSM6-206ENST00000510331 SOCS3O14543 225 aa13.52□□□□□ -0.25
LSM6-206ENST00000510331 MBPP02686 304 aaPredicted RBP13.52□□□□□ -0.25
LSM6-206ENST00000510331 ATF4P18848 351 aaPredicted RBP13.52□□□□□ -0.25
LSM6-206ENST00000510331 RRAS2P62070 204 aaPredicted RBP13.52□□□□□ -0.25
LSM6-206ENST00000510331 C1orf194Q5T5A4 169 aa13.52□□□□□ -0.25
LSM6-206ENST00000510331 MORN3Q6PF18 240 aaPredicted RBP13.52□□□□□ -0.25
LSM6-206ENST00000510331 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.25
LSM6-206ENST00000510331 BPIFCQ8NFQ6 507 aa13.52□□□□□ -0.25
LSM6-206ENST00000510331 SLC25A32Q9H2D1 315 aa13.52□□□□□ -0.25
LSM6-206ENST00000510331 CLEC5AQ9NY25 188 aa13.52□□□□□ -0.25
LSM6-206ENST00000510331 FBXL17Q9UF56 701 aa13.52□□□□□ -0.25
LSM6-206ENST00000510331 NUPR2A6NF83 97 aa13.51□□□□□ -0.25
LSM6-206ENST00000510331 TMEM144Q7Z5S9 345 aa13.51□□□□□ -0.25
LSM6-206ENST00000510331 OR8I2Q8N0Y5 310 aa13.51□□□□□ -0.25
LSM6-206ENST00000510331 ZNF431Q8TF32 576 aaPredicted RBP13.51□□□□□ -0.25
LSM6-206ENST00000510331 SLC25A22Q9H936 323 aa13.51□□□□□ -0.25
LSM6-206ENST00000510331 SEPSECSQ9HD40 501 aaKnown RBP13.51□□□□□ -0.25
LSM6-206ENST00000510331 DOK5Q9P104 306 aa13.51□□□□□ -0.25
LSM6-206ENST00000510331 FAM25EA8MYX2 175 aa13.5□□□□□ -0.25
LSM6-206ENST00000510331 TSC22D2O75157 780 aa13.5□□□□□ -0.25
LSM6-206ENST00000510331 ORM2P19652 201 aa13.5□□□□□ -0.25
LSM6-206ENST00000510331 DLK1P80370 383 aa13.5□□□□□ -0.25
LSM6-206ENST00000510331 GDF5OSQ5U4N7 250 aa13.5□□□□□ -0.25
LSM6-206ENST00000510331 LINC00299Q6ZSB3 139 aa13.5□□□□□ -0.25
LSM6-206ENST00000510331 Q8NAQ8 132 aa13.5□□□□□ -0.25
LSM6-206ENST00000510331 OR1B1Q8NGR6 318 aa13.5□□□□□ -0.25
LSM6-206ENST00000510331 A6NHS1 94 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 H3BMM0 161 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 CFDP00746 253 aaPredicted RBP13.49□□□□□ -0.25
LSM6-206ENST00000510331 H2AFB2P0C5Z0 115 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 HLA-DRB4P13762 266 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 PSMB3P49720 205 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 ASAH1Q13510 395 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 TMEM41BQ5BJD5 291 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 CYP2G1PQ6ZSU1 146 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 S100ZQ8WXG8 99 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 LINC00052Q96N35 136 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 TMEM147Q9BVK8 224 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 SCRT1Q9BWW7 348 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 SLC45A2Q9UMX9 530 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 HLA-DRB4X5D2U9 266 aa13.49□□□□□ -0.25
LSM6-206ENST00000510331 IGHV4-28A0A0C4DH34 117 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 FAM240BA0A1B0GVZ2 78 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 C7orf66A4D0T2 115 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 ZNF98A6NK75 572 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 TAS2R30P59541 319 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 NANOS2P60321 138 aaKnown RBP13.48□□□□□ -0.25
LSM6-206ENST00000510331 SLC38A11Q08AI6 406 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 ARL16Q0P5N6 197 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 ZNF846Q147U1 533 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 CEMP1Q6PRD7 247 aaPredicted RBP13.48□□□□□ -0.25
LSM6-206ENST00000510331 CSNK1G2-AS1Q8NCQ2 148 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 C17orf77Q96MU5 243 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 LSM5Q9Y4Y9 91 aaKnown RBP13.48□□□□□ -0.25
LSM6-206ENST00000510331 X6R8D5 127 aa13.48□□□□□ -0.25
LSM6-206ENST00000510331 EPPK1P58107 5090 aaKnown RBP13.47□□□□□ -0.25
LSM6-206ENST00000510331 H3BRN7 92 aa13.47□□□□□ -0.25
LSM6-206ENST00000510331 K7EPK0 472 aa13.47□□□□□ -0.25
LSM6-206ENST00000510331 IL5P05113 134 aa13.47□□□□□ -0.25
LSM6-206ENST00000510331 LINC00869P0C866 280 aa13.47□□□□□ -0.25
LSM6-206ENST00000510331 C12orf45Q8N5I9 185 aaPredicted RBP13.47□□□□□ -0.25
LSM6-206ENST00000510331 OR10P1Q8NGE3 313 aa13.47□□□□□ -0.25
LSM6-206ENST00000510331 PTTG2Q9NZH5 202 aa13.47□□□□□ -0.25
LSM6-206ENST00000510331 MGAT4CQ9UBM8 478 aa13.47□□□□□ -0.25
LSM6-206ENST00000510331 C5orf51A6NDU8 294 aa13.46□□□□□ -0.25
LSM6-206ENST00000510331 ZNF705EA8MWA4 302 aaPredicted RBP13.46□□□□□ -0.25
LSM6-206ENST00000510331 IGKV3-20P01619 116 aa13.46□□□□□ -0.25
LSM6-206ENST00000510331 ID1P41134 155 aa13.46□□□□□ -0.25
LSM6-206ENST00000510331 GALR1P47211 349 aa13.46□□□□□ -0.25
LSM6-206ENST00000510331 MZT2BQ6NZ67 158 aa13.46□□□□□ -0.25
LSM6-206ENST00000510331 C11orf45Q8TAV5 145 aa13.46□□□□□ -0.25
LSM6-206ENST00000510331 PHLDA1Q8WV24 401 aaPredicted RBP13.46□□□□□ -0.25
LSM6-206ENST00000510331 LINC00476Q8WZB0 136 aa13.46□□□□□ -0.25
LSM6-206ENST00000510331 C20orf173Q96LM9 149 aa13.46□□□□□ -0.25
LSM6-206ENST00000510331 UHRF2Q96PU4 802 aa13.46□□□□□ -0.25
LSM6-206ENST00000510331 SAV1Q9H4B6 383 aaPredicted RBP13.46□□□□□ -0.25
LSM6-206ENST00000510331 XCL2Q9UBD3 114 aa13.46□□□□□ -0.25
LSM6-206ENST00000510331 FNDC10F2Z333 226 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 F6UB75 175 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 L7N2F9 121 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 ISLRO14498 428 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 UPK1BO75841 260 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 RBMY1A1P0DJD3 496 aaKnown RBP13.45□□□□□ -0.26
LSM6-206ENST00000510331 RBMY1CP0DJD4 496 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 VAMP2P63027 116 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 RBMY1FQ15415 496 aaKnown RBP13.45□□□□□ -0.26
LSM6-206ENST00000510331 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 FOXI2Q6ZQN5 318 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 SHANK2-AS3Q9BTD1 123 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 RSG1Q9BU20 258 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 SLC25A39Q9BZJ4 359 aaPredicted RBP13.45□□□□□ -0.26
LSM6-206ENST00000510331 HIGD1AQ9Y241 93 aa13.45□□□□□ -0.26
LSM6-206ENST00000510331 MIFP14174 115 aa13.44□□□□□ -0.26
LSM6-206ENST00000510331 MEOX2P50222 304 aa13.44□□□□□ -0.26
LSM6-206ENST00000510331 FXYD7P58549 80 aa13.44□□□□□ -0.26
LSM6-206ENST00000510331 S100A10P60903 97 aa13.44□□□□□ -0.26
LSM6-206ENST00000510331 IFITM3Q01628 133 aa13.44□□□□□ -0.26
LSM6-206ENST00000510331 ENKURQ8TC29 256 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms