RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 POLR2IP36954 125 aaKnown RBP3.11□□□□□ -1.91
NEDD4-209ENST00000508871 LPAR6P43657 344 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 RPS10P46783 165 aaKnown RBP3.11□□□□□ -1.91
NEDD4-209ENST00000508871 BSPH1Q075Z2 132 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 C1orf194Q5T5A4 169 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 PVRIGQ6DKI7 326 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM136Q6ZRR5 245 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 C1QL2Q7Z5L3 287 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 OR4S1Q8NGB4 309 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 A0A087WUU8 490 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 K7EMT4 169 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 WNT9BO14905 357 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 SRSF10O75494 262 aaKnown RBP3.11□□□□□ -1.91
NEDD4-209ENST00000508871 IGKV1D-16P01601 117 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 CIARTQ8N365 385 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-209ENST00000508871 SLC30A7Q8NEW0 376 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 SMDT1Q9H4I9 107 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 MRPL27Q9P0M9 148 aaKnown RBP3.11□□□□□ -1.91
NEDD4-209ENST00000508871 CD3DP04234 171 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 FUSP35637 526 aaKnown RBP eCLIP3.11□□□□□ -1.91
NEDD4-209ENST00000508871 NPC2P61916 151 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 HOXC5Q00444 222 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 CSRP2Q16527 193 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 MARCH3Q86UD3 253 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF429Q86V71 674 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 DRAM1Q8N682 238 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 DEFB119Q8N690 84 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 KIAA1549Q9HCM3 1950 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 IGHV1-45A0A0A0MS14 117 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 GRIFINA4D1Z8 144 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF432O94892 652 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 HLA-DMBP28068 263 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 CXCL6P80162 114 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 C12orf74Q32Q52 190 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 UNQ5815/PRO19632Q6UWF5 114 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 OVOL2Q9BRP0 275 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 CHAC1Q9BUX1 264 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 ERG28Q9UKR5 140 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 M0R233 179 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 NDUFB2O95178 105 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 STATHP02808 62 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 CRYBB3P26998 211 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 DEFB110Q30KQ9 67 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 UNQ9370/PRO34162Q6UXP9 181 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 NRACQ8N912 160 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 OR10P1Q8NGE3 313 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 C11orf45Q8TAV5 145 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 PLEKHB2Q96CS7 222 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 ADAT3Q96EY9 351 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM191AQ9H0A3 160 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 SMPXQ9UHP9 88 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 DOCK9Q9BZ29 2069 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 CROCCQ5TZA2 2017 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 LOC102725191A0A1B0GVB3 256 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 A0A1B0GWA3 101 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 PDCD5O14737 125 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF90Q03938 601 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM78Q5T7P6 136 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 RNF182Q8N6D2 247 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM105Q8N8V8 129 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 RASL10AQ92737 203 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 MRPS12O15235 138 aaKnown RBP3.1□□□□□ -1.91
NEDD4-209ENST00000508871 ASAH2BP0C7U1 165 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 TGFBR1P36897 503 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 BTG2P78543 158 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF876PQ49A33 203 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 ATOH7Q8N100 152 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 FGF23Q9GZV9 251 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-209ENST00000508871 A0A0B4J2C4 111 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF860A6NHJ4 632 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 CRYM-AS1A6NIL9 109 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 CRYGDP07320 174 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 BLVRBP30043 206 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-209ENST00000508871 RPL27AP46776 148 aaKnown RBP3.1□□□□□ -1.91
NEDD4-209ENST00000508871 GGNQ86UU5 652 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 SPTSSBQ8NFR3 76 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 PLA2G12AQ9BZM1 189 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM222Q9H0R3 208 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM242Q9NWH2 141 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 A0A1B0GW64 132 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 TRDV1A0A1B0GX56 115 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 FNDC10F2Z333 226 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 IGHG1P01857 330 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 CFPP27918 469 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 HILS1P60008 231 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 TNFAIP6P98066 277 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-209ENST00000508871 FHL1Q13642 323 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 GUCA2BQ16661 112 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 C1orf140Q5VVS0 124 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 OR10J6PQ8NGY7 276 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 Q8TCH9 128 aa3.1□□□□□ -1.91
NEDD4-209ENST00000508871 GOLGB1Q14789 3259 aaKnown RBP3.09□□□□□ -1.91
NEDD4-209ENST00000508871 DYSFO75923 2080 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 NPIPB7O75200 414 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 SNRNP200O75643 2136 aaKnown RBP3.09□□□□□ -1.91
NEDD4-209ENST00000508871 GLIPR1L1Q6UWM5 242 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 NEGR1Q7Z3B1 354 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 OR8A1Q8NGG7 326 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 OR5C1Q8NGR4 320 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 PFN4Q8NHR9 129 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms