RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 DUSP18Q8NEJ0 188 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 OR52B4Q8NGK2 314 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 OR1L6Q8NGR2 347 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 OR2K2Q8NGT1 345 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 TMEM190Q8WZ59 177 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 SCGB3A2Q96PL1 93 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 RNF2Q99496 336 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 TXN2Q99757 166 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 PDCD10Q9BUL8 212 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 RHPN1-AS1Q9BWJ2 59 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 SRRQ9GZT4 340 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 MAGT1Q9H0U3 335 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 SRD5A3Q9H8P0 318 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 PALMDQ9NP74 551 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 SLC2A8Q9NY64 477 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 MRPL27Q9P0M9 148 aaKnown RBP3.36□□□□□ -1.87
NUP54-206ENST00000508465 SMPXQ9UHP9 88 aa3.36□□□□□ -1.87
NUP54-206ENST00000508465 TRAV14DV4A0A0A6YYC5 116 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 IGHV7-4-1A0A0J9YVY3 117 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 C15orf62A8K5M9 175 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 A8MWP6 167 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 K7EMT4 169 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 ZNF701M0R085 212 aaPredicted RBP3.35□□□□□ -1.87
NUP54-206ENST00000508465 CHEK1O14757 476 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 PLA2G10O15496 165 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 DFFBO76075 338 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 SFT2D2O95562 160 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 IFNA10P01566 189 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 IGKV1-17P01599 117 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 IAPPP10997 89 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 RPL35AP18077 110 aaKnown RBP3.35□□□□□ -1.87
NUP54-206ENST00000508465 FAUP35544 74 aaKnown RBP3.35□□□□□ -1.87
NUP54-206ENST00000508465 OPRK1P41145 380 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 HTR2BP41595 481 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 NPBWR1P48145 328 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 RND2P52198 227 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 RELQ04864 619 aaPredicted RBP3.35□□□□□ -1.87
NUP54-206ENST00000508465 TNFRSF9Q07011 255 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 SMCO1Q147U7 214 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 VWC2Q2TAL6 325 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 BSXQ3C1V8 233 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 TMEM128Q5BJH2 165 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 NMSQ5H8A3 153 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 PVRIGQ6DKI7 326 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 ZFAND6Q6FIF0 208 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 LAMTOR1Q6IAA8 161 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 ETFRF1Q6IPR1 90 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 WDR73Q6P4I2 378 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 PRSS54Q6PEW0 395 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 LINC00322Q6ZN03 302 aaPredicted RBP3.35□□□□□ -1.87
NUP54-206ENST00000508465 APRG1Q8IVJ8 170 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 LGI3Q8N145 548 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 ZNF114Q8NC26 417 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 OR52E5Q8NH55 327 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 OR1S1Q8NH92 325 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 MARC2Q969Z3 335 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 GALNT14Q96FL9 552 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 ACY3Q96HD9 319 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 TM2D3Q9BRN9 247 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 DAZ1Q9NQZ3 744 aaKnown RBP3.35□□□□□ -1.87
NUP54-206ENST00000508465 PAIP2BQ9ULR5 123 aaKnown RBP3.35□□□□□ -1.87
NUP54-206ENST00000508465 PUS1Q9Y606 427 aaKnown RBP eCLIP3.35□□□□□ -1.87
NUP54-206ENST00000508465 TENM2Q9NT68 2774 aa3.35□□□□□ -1.87
NUP54-206ENST00000508465 TRAV25A0A0B4J276 109 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 A0A0B4J2A0 478 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 C9orf170A2RU37 121 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 MPTX1A8MV57 137 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 INS-IGF2F8WCM5 200 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 WRBO00258 174 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 PITX3O75364 302 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 CLN5O75503 358 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 ADAP1O75689 374 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 NDUFB6O95139 128 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 IFNA4P05014 189 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 ANXA3P12429 323 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 IL7P13232 177 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 NPPCP23582 126 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 NPY1RP25929 384 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 OR10J1P30954 320 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 FCGR2BP31994 310 aaPredicted RBP3.34□□□□□ -1.87
NUP54-206ENST00000508465 UBE2MP61081 183 aaKnown RBP3.34□□□□□ -1.87
NUP54-206ENST00000508465 ARL16Q0P5N6 197 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 OR2F1Q13607 317 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 AARDQ4LEZ3 155 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 C2orf83Q53S99 150 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 GGNBP1Q5YKI7 109 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 TRIQKQ629K1 86 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 ZNF600Q6ZNG1 722 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 TCF24Q7RTU0 167 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 SLC16A13Q7RTY0 426 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 CENPSQ8N2Z9 138 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 FAM24BQ8N5W8 94 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 OR4X1Q8NH49 305 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 DTD1Q8TEA8 209 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 IL22RA2Q969J5 263 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 OR10C1Q96KK4 312 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 SLC25A21Q9BQT8 299 aaPredicted RBP3.34□□□□□ -1.87
NUP54-206ENST00000508465 SPXQ9BT56 116 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 NDUFA13Q9P0J0 144 aa3.34□□□□□ -1.87
NUP54-206ENST00000508465 SHPKQ9UHJ6 478 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms