RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DEDD2Q8WXF8 326 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 SLC25A21Q9BQT8 299 aaPredicted RBP9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 SAV1Q9H4B6 383 aaPredicted RBP9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 PFDN2Q9UHV9 154 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 ZNF705FA8MVS1 300 aaPredicted RBP9.34□□□□□ -0.91
HMGCS1-205ENST00000508319 SFT2D2O95562 160 aa9.34□□□□□ -0.91
HMGCS1-205ENST00000508319 ZNF705DP0CH99 300 aaPredicted RBP9.34□□□□□ -0.91
HMGCS1-205ENST00000508319 ZNF705BP0CI00 300 aaPredicted RBP9.34□□□□□ -0.91
HMGCS1-205ENST00000508319 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.91
HMGCS1-205ENST00000508319 ZNF767PQ75MW2 155 aa9.34□□□□□ -0.91
HMGCS1-205ENST00000508319 RNF126Q9BV68 326 aa9.34□□□□□ -0.91
HMGCS1-205ENST00000508319 MAGT1Q9H0U3 335 aa9.34□□□□□ -0.91
HMGCS1-205ENST00000508319 TMED3Q9Y3Q3 217 aa9.34□□□□□ -0.91
HMGCS1-205ENST00000508319 HERC2O95714 4834 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 hCG_2014768A0A024R1R8 64 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 SNRPGP15A8MWD9 76 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 SYNGR2O43760 224 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 MED6O75586 246 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 IGKV3-20P01619 116 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 CCDC190Q86UF4 302 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 CENPSQ8N2Z9 138 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 COQ8AQ8NI60 647 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 LINC00052Q96N35 136 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 CLUHP3Q96NS8 147 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 CIB3Q96Q77 187 aaPredicted RBP9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 NEU1Q99519 415 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 SCRT1Q9BWW7 348 aa9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 RBM38Q9H0Z9 239 aaKnown RBP9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 PAIP2BQ9ULR5 123 aaKnown RBP9.33□□□□□ -0.92
HMGCS1-205ENST00000508319 DEFB131BA0A096LNP1 70 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 ISLRO14498 428 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 HOXB5P09067 269 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 S100A5P33763 92 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 ID1P41134 155 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 PAX9P55771 341 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 FXYD7P58549 80 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 LINC01559Q495D7 138 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 GGNBP1Q5YKI7 109 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 OR8I2Q8N0Y5 310 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 PPP1R14BQ96C90 147 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 C17orf77Q96MU5 243 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 SLC35B3Q9H1N7 401 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 SLC25A32Q9H2D1 315 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 DNAH17Q9UFH2 4485 aa9.32□□□□□ -0.92
HMGCS1-205ENST00000508319 PKHD1P08F94 4074 aa9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 F6UB75 175 aa9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 H3BP45 60 aa9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 WRBO00258 174 aa9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 UBE2MP61081 183 aaKnown RBP9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 SAMD13Q5VXD3 122 aa9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 TMEM182Q6ZP80 229 aaPredicted RBP9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 ACOT7LQ6ZUV0 252 aa9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 C20orf173Q96LM9 149 aa9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 SRRQ9GZT4 340 aa9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 SLC45A2Q9UMX9 530 aa9.31□□□□□ -0.92
HMGCS1-205ENST00000508319 IGHV3OR16-12A0A075B7B8 117 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 A0A0J9YX75 114 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 TMEM189A5PLL7 270 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 CCDC160A6NGH7 325 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 ZNF98A6NK75 572 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 CFDP00746 253 aaPredicted RBP9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 GATA2P23769 480 aaPredicted RBP9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 MEOX2P50222 304 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 RPP30P78346 268 aaKnown RBP9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 SPANXN5Q5MJ07 72 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 FAM78BQ5VT40 261 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 SPATA31B1PQ5VZV4 182 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 OR4B1Q8NGF8 309 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 SLC25A22Q9H936 323 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 KIAA1109Q2LD37 5005 aa9.3□□□□□ -0.92
HMGCS1-205ENST00000508319 C9orf170A2RU37 121 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 SMIM9A6NGZ8 99 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 A8MTW9 85 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 ADAP1O75689 374 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 GALR1P47211 349 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 EMP1P54849 157 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 PSG9Q00887 426 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 ID3Q02535 119 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 AKR1C1Q04828 323 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 SPANXN2Q5MJ10 180 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 C1orf158Q8N1D5 194 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 BPIFCQ8NFQ6 507 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 C16orf92Q96LL3 132 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 STRAPQ9Y3F4 350 aaKnown RBP9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 RFNGQ9Y644 331 aa9.29□□□□□ -0.92
HMGCS1-205ENST00000508319 NDUFB6O95139 128 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 SPART-AS1P0CW21 52 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 ORM2P19652 201 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 POLR2GP62487 172 aaKnown RBP eCLIP9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 EBLN2Q6P2I7 272 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 AMTNQ6UX39 209 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 OR4D5Q8NGN0 318 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 RSG1Q9BU20 258 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 NDUFAF3Q9BU61 184 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 RPRMQ9NS64 109 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 DOK5Q9P104 306 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 DKK2Q9UBU2 259 aa9.28□□□□□ -0.92
HMGCS1-205ENST00000508319 PMS2P5A8MQ11 134 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 285.4 ms