RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ZNF705AQ6ZN79 300 aaPredicted RBP11.52□□□□□ -0.57
DDX41-208ENST00000507955 C8orf46Q8TAG6 207 aa11.52□□□□□ -0.57
DDX41-208ENST00000507955 SAMD10Q9BYL1 202 aa11.52□□□□□ -0.57
DDX41-208ENST00000507955 OSTCQ9NRP0 149 aa11.52□□□□□ -0.57
DDX41-208ENST00000507955 F11RQ9Y624 299 aaKnown RBP11.52□□□□□ -0.57
DDX41-208ENST00000507955 G0S2P27469 103 aa11.51□□□□□ -0.57
DDX41-208ENST00000507955 TIGITQ495A1 244 aa11.51□□□□□ -0.57
DDX41-208ENST00000507955 PRR27Q6MZM9 219 aa11.51□□□□□ -0.57
DDX41-208ENST00000507955 ZNF329Q86UD4 541 aa11.51□□□□□ -0.57
DDX41-208ENST00000507955 TIMD4Q96H15 378 aa11.51□□□□□ -0.57
DDX41-208ENST00000507955 BPIFB3P59826 476 aa11.51□□□□□ -0.57
DDX41-208ENST00000507955 OR1L4Q8NGR5 311 aa11.51□□□□□ -0.57
DDX41-208ENST00000507955 UBTD1Q9HAC8 227 aa11.51□□□□□ -0.57
DDX41-208ENST00000507955 C19orf84I3L1E1 186 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 BMPR1BO00238 502 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 RBP4P02753 201 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 GPX1P07203 203 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 PSG1P11464 419 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 LYZP61626 148 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 IBA57Q5T440 356 aaKnown RBP11.5□□□□□ -0.57
DDX41-208ENST00000507955 Q71RC1 249 aaPredicted RBP11.5□□□□□ -0.57
DDX41-208ENST00000507955 TMEM116Q8NCL8 245 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 C20orf144Q9BQM9 153 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 DPM3Q9P2X0 92 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 ZNF124Q15973 351 aa11.5□□□□□ -0.57
DDX41-208ENST00000507955 IGSF10Q6WRI0 2623 aa11.49□□□□□ -0.57
DDX41-208ENST00000507955 SMIM27A0A1W2PRY6 76 aa11.49□□□□□ -0.57
DDX41-208ENST00000507955 CFHR4Q92496 578 aa11.49□□□□□ -0.57
DDX41-208ENST00000507955 TBL2Q9Y4P3 447 aaKnown RBP11.49□□□□□ -0.57
DDX41-208ENST00000507955 A0A1W2PS18 150 aa11.49□□□□□ -0.57
DDX41-208ENST00000507955 PGPA6NDG6 321 aa11.49□□□□□ -0.57
DDX41-208ENST00000507955 A6NNC1 897 aa11.49□□□□□ -0.57
DDX41-208ENST00000507955 SRIP30626 198 aa11.49□□□□□ -0.57
DDX41-208ENST00000507955 KRTDAPP60985 99 aa11.49□□□□□ -0.57
DDX41-208ENST00000507955 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
DDX41-208ENST00000507955 ASCL2Q99929 193 aa11.49□□□□□ -0.57
DDX41-208ENST00000507955 CDC42EP3Q9UKI2 254 aa11.49□□□□□ -0.57
DDX41-208ENST00000507955 I3L2K1 104 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 ETFRF1Q6IPR1 90 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 VMO1Q7Z5L0 202 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 MIEN1Q9BRT3 115 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 NCBP2LA6PVI3 153 aaKnown RBP11.48□□□□□ -0.57
DDX41-208ENST00000507955 CORTO00230 105 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 PEX7O00628 323 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 HYPMO75409 117 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 IGLC1P0CG04 106 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 PMCHP20382 165 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 BRS3P32247 399 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 SLAQ13239 276 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 PVRIGQ6DKI7 326 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 SIGLECL1Q8N7X8 197 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 OR11H6Q8NGC7 330 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 TRGV9Q99603 122 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
DDX41-208ENST00000507955 NBR2O15453 112 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 AMY1AP04745 511 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 SLC25A5P05141 298 aaKnown RBP11.47□□□□□ -0.57
DDX41-208ENST00000507955 NBEAP1P0C6P0 100 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 C22orf15Q8WYQ4 148 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 PERPQ96FX8 193 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 RNF2Q99496 336 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 CENPEQ02224 2701 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 ZFYVE26Q68DK2 2539 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 IGHV3-23P01764 117 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 MT-ND6P03923 174 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 GNLYP22749 145 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 AMTP48728 403 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 TMEM183BQ1AE95 376 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 GDF5OSQ5U4N7 250 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 WDR73Q6P4I2 378 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 FAM19A2Q8N3H0 131 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 KCNS1Q96KK3 526 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 LPAR2Q9HBW0 351 aa11.47□□□□□ -0.57
DDX41-208ENST00000507955 ZNF253O75346 499 aa11.46□□□□□ -0.57
DDX41-208ENST00000507955 IGKV1-17P01599 117 aa11.46□□□□□ -0.57
DDX41-208ENST00000507955 GPR6P46095 362 aaPredicted RBP11.46□□□□□ -0.57
DDX41-208ENST00000507955 NDPQ00604 133 aa11.46□□□□□ -0.57
DDX41-208ENST00000507955 C17orf77Q96MU5 243 aa11.46□□□□□ -0.57
DDX41-208ENST00000507955 TRAV8-1A0A0A6YYK1 113 aa11.46□□□□□ -0.58
DDX41-208ENST00000507955 K7EIM0 57 aa11.46□□□□□ -0.58
DDX41-208ENST00000507955 PRTN3P24158 256 aa11.46□□□□□ -0.58
DDX41-208ENST00000507955 OR10J3Q5JRS4 329 aa11.46□□□□□ -0.58
DDX41-208ENST00000507955 NIT1Q86X76 327 aa11.46□□□□□ -0.58
DDX41-208ENST00000507955 USP9XQ93008 2570 aaPredicted RBP11.46□□□□□ -0.58
DDX41-208ENST00000507955 DIRC3C9JPN6 131 aa11.45□□□□□ -0.58
DDX41-208ENST00000507955 GP9P14770 177 aa11.45□□□□□ -0.58
DDX41-208ENST00000507955 MYCNOSP40205 109 aa11.45□□□□□ -0.58
DDX41-208ENST00000507955 EXOC3-AS1Q8N2X6 119 aa11.45□□□□□ -0.58
DDX41-208ENST00000507955 NEU4Q8WWR8 484 aaPredicted RBP11.45□□□□□ -0.58
DDX41-208ENST00000507955 MBD6Q96DN6 1003 aa11.45□□□□□ -0.58
DDX41-208ENST00000507955 ACACBO00763 2458 aa11.45□□□□□ -0.58
DDX41-208ENST00000507955 IZUMO1RA6ND01 250 aa11.45□□□□□ -0.58
DDX41-208ENST00000507955 ODF3BA8MYP8 253 aa11.45□□□□□ -0.58
DDX41-208ENST00000507955 ZNF25P17030 456 aaPredicted RBP11.45□□□□□ -0.58
DDX41-208ENST00000507955 LINC00322Q6ZN03 302 aaPredicted RBP11.45□□□□□ -0.58
DDX41-208ENST00000507955 RASL11BQ9BPW5 248 aa11.45□□□□□ -0.58
DDX41-208ENST00000507955 EPDR1Q9UM22 224 aa11.45□□□□□ -0.58
DDX41-208ENST00000507955 CTRLP40313 264 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms