RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 TOMM20LQ6UXN7 152 aa9.87□□□□□ -0.83
DDR1-260ENST00000507533 MISP3Q96FF7 219 aa9.87□□□□□ -0.83
DDR1-260ENST00000507533 RBKSQ9H477 322 aa9.87□□□□□ -0.83
DDR1-260ENST00000507533 MYCBP2O75592 4640 aa9.86□□□□□ -0.83
DDR1-260ENST00000507533 INMT-MINDY4F8WBC2 141 aa9.86□□□□□ -0.83
DDR1-260ENST00000507533 K7EQG2 157 aa9.86□□□□□ -0.83
DDR1-260ENST00000507533 HTN3P15516 51 aa9.86□□□□□ -0.83
DDR1-260ENST00000507533 HTR2BP41595 481 aa9.86□□□□□ -0.83
DDR1-260ENST00000507533 EMP1P54849 157 aa9.86□□□□□ -0.83
DDR1-260ENST00000507533 FAM3BP58499 235 aaPredicted RBP9.86□□□□□ -0.83
DDR1-260ENST00000507533 C12orf45Q8N5I9 185 aaPredicted RBP9.86□□□□□ -0.83
DDR1-260ENST00000507533 STXBP6Q8NFX7 210 aa9.86□□□□□ -0.83
DDR1-260ENST00000507533 GRAMD2BQ96HH9 432 aa9.86□□□□□ -0.83
DDR1-260ENST00000507533 TXN2Q99757 166 aa9.86□□□□□ -0.83
DDR1-260ENST00000507533 NBDYA0A0U1RRE5 68 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 I3L2K1 104 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 CORTO00230 105 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 GNG7O60262 68 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 MED6O75586 246 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 MT-CO2P00403 227 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 C2orf83Q53S99 150 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 SLC24A4Q8NFF2 622 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 DTD1Q8TEA8 209 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 MARVELD1Q9BSK0 173 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 C1QTNF4Q9BXJ3 329 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 TMEM231Q9H6L2 316 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 GPN1Q9HCN4 374 aaPredicted RBP9.85□□□□□ -0.83
DDR1-260ENST00000507533 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
DDR1-260ENST00000507533 UBR4Q5T4S7 5183 aa9.84□□□□□ -0.83
DDR1-260ENST00000507533 FAT1Q14517 4588 aa9.84□□□□□ -0.83
DDR1-260ENST00000507533 TMEM189A5PLL7 270 aa9.84□□□□□ -0.83
DDR1-260ENST00000507533 PRAF2O60831 178 aa9.84□□□□□ -0.83
DDR1-260ENST00000507533 ID3Q02535 119 aa9.84□□□□□ -0.83
DDR1-260ENST00000507533 NOXA1Q86UR1 476 aa9.84□□□□□ -0.83
DDR1-260ENST00000507533 PINX1Q96BK5 328 aaKnown RBP9.84□□□□□ -0.83
DDR1-260ENST00000507533 RAB40CQ96S21 281 aa9.84□□□□□ -0.83
DDR1-260ENST00000507533 ATG101Q9BSB4 218 aa9.84□□□□□ -0.83
DDR1-260ENST00000507533 U3KQ87 197 aa9.84□□□□□ -0.83
DDR1-260ENST00000507533 SNRPGP15A8MWD9 76 aa9.83□□□□□ -0.84
DDR1-260ENST00000507533 SYNGR2O43760 224 aa9.83□□□□□ -0.84
DDR1-260ENST00000507533 ATP5IP56385 69 aaPredicted RBP9.83□□□□□ -0.84
DDR1-260ENST00000507533 NUTF2P61970 127 aaKnown RBP9.83□□□□□ -0.84
DDR1-260ENST00000507533 IAH1Q2TAA2 248 aaPredicted RBP9.83□□□□□ -0.84
DDR1-260ENST00000507533 TMEM88Q6PEY1 159 aa9.83□□□□□ -0.84
DDR1-260ENST00000507533 ZBTB8BQ8NAP8 495 aaPredicted RBP9.83□□□□□ -0.84
DDR1-260ENST00000507533 OR4D5Q8NGN0 318 aa9.83□□□□□ -0.84
DDR1-260ENST00000507533 TMEM170AQ8WVE7 144 aa9.83□□□□□ -0.84
DDR1-260ENST00000507533 NIPSNAP3BQ9BS92 247 aa9.83□□□□□ -0.84
DDR1-260ENST00000507533 MAGT1Q9H0U3 335 aa9.83□□□□□ -0.84
DDR1-260ENST00000507533 PUS1Q9Y606 427 aaKnown RBP eCLIP9.83□□□□□ -0.84
DDR1-260ENST00000507533 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
DDR1-260ENST00000507533 CCSO14618 274 aa9.82□□□□□ -0.84
DDR1-260ENST00000507533 PTTG1O95997 202 aa9.82□□□□□ -0.84
DDR1-260ENST00000507533 IAPPP10997 89 aa9.82□□□□□ -0.84
DDR1-260ENST00000507533 OPRK1P41145 380 aa9.82□□□□□ -0.84
DDR1-260ENST00000507533 NKX2-1P43699 371 aaPredicted RBP9.82□□□□□ -0.84
DDR1-260ENST00000507533 RNASEH2CQ8TDP1 164 aaKnown RBP9.82□□□□□ -0.84
DDR1-260ENST00000507533 CIB3Q96Q77 187 aaPredicted RBP9.82□□□□□ -0.84
DDR1-260ENST00000507533 NEU1Q99519 415 aa9.82□□□□□ -0.84
DDR1-260ENST00000507533 FNDC4Q9H6D8 234 aaPredicted RBP9.82□□□□□ -0.84
DDR1-260ENST00000507533 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
DDR1-260ENST00000507533 DKK2Q9UBU2 259 aa9.82□□□□□ -0.84
DDR1-260ENST00000507533 TEX48A0A1B0GUV7 120 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 RPS10-NUDT3A0A1W2PQS6 291 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 A0A1W2PS18 150 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 C5orf51A6NDU8 294 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 FAM25EA8MYX2 175 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 WRBO00258 174 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 NPPCP23582 126 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 NPBWR1P48145 328 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 KRTAP10-2P60368 255 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 POLR2GP62487 172 aaKnown RBP eCLIP9.81□□□□□ -0.84
DDR1-260ENST00000507533 MLANAQ16655 118 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 PSMG4Q5JS54 123 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 FAM222AQ5U5X8 452 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 ZNF705AQ6ZN79 300 aaPredicted RBP9.81□□□□□ -0.84
DDR1-260ENST00000507533 ZNF600Q6ZNG1 722 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 ZNRF2Q8NHG8 242 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 DCANP1Q8TF63 244 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 GSKIPQ9P0R6 139 aa9.81□□□□□ -0.84
DDR1-260ENST00000507533 SMIM9A6NGZ8 99 aa9.8□□□□□ -0.84
DDR1-260ENST00000507533 P2RY1P47900 373 aa9.8□□□□□ -0.84
DDR1-260ENST00000507533 RPP30P78346 268 aaKnown RBP9.8□□□□□ -0.84
DDR1-260ENST00000507533 ETFRF1Q6IPR1 90 aa9.8□□□□□ -0.84
DDR1-260ENST00000507533 GSG1LQ6UXU4 331 aa9.8□□□□□ -0.84
DDR1-260ENST00000507533 C2orf50Q96LR7 162 aa9.8□□□□□ -0.84
DDR1-260ENST00000507533 RFNGQ9Y644 331 aa9.8□□□□□ -0.84
DDR1-260ENST00000507533 IGHV3OR16-12A0A075B7B8 117 aa9.79□□□□□ -0.84
DDR1-260ENST00000507533 ZNF705FA8MVS1 300 aaPredicted RBP9.79□□□□□ -0.84
DDR1-260ENST00000507533 CLN5O75503 358 aa9.79□□□□□ -0.84
DDR1-260ENST00000507533 TMEM50AO95807 157 aa9.79□□□□□ -0.84
DDR1-260ENST00000507533 SCGB1D2O95969 90 aa9.79□□□□□ -0.84
DDR1-260ENST00000507533 ZNF705DP0CH99 300 aaPredicted RBP9.79□□□□□ -0.84
DDR1-260ENST00000507533 ZNF705BP0CI00 300 aaPredicted RBP9.79□□□□□ -0.84
DDR1-260ENST00000507533 SLC25A4P12235 298 aa9.79□□□□□ -0.84
DDR1-260ENST00000507533 RAB11AP62491 216 aa9.79□□□□□ -0.84
DDR1-260ENST00000507533 OXA1LQ15070 435 aa9.79□□□□□ -0.84
DDR1-260ENST00000507533 C15orf53Q8NAA6 179 aa9.79□□□□□ -0.84
DDR1-260ENST00000507533 OR4X1Q8NH49 305 aa9.79□□□□□ -0.84
DDR1-260ENST00000507533 SMIM8Q96KF7 97 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms