RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 OR4B1Q8NGF8 309 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 TRGV9Q99603 122 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 SOSTQ9BQB4 213 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 PAIP2BQ9ULR5 123 aaKnown RBP8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 TMEM189A5PLL7 270 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 SNRPGP15A8MWD9 76 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 F6UB75 175 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 SPART-AS1P0CW21 52 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 P0DMU3 169 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 VAMP1P23763 118 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 FAUP35544 74 aaKnown RBP8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 RAB11AP62491 216 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 ZNF79Q15937 498 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 OR8I2Q8N0Y5 310 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 THAP8Q8NA92 274 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 TRIM63Q969Q1 353 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 CLUHP3Q96NS8 147 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 SLC35B3Q9H1N7 401 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 RFNGQ9Y644 331 aa8.25□□□□□ -1.09
HMGCS1-204ENST00000507293 IGKV1OR2-108A0A075B7D4 117 aa8.24□□□□□ -1.09
HMGCS1-204ENST00000507293 PIGBOS1A0A0B4J2F0 54 aa8.24□□□□□ -1.09
HMGCS1-204ENST00000507293 ISLRO14498 428 aa8.24□□□□□ -1.09
HMGCS1-204ENST00000507293 PAX9P55771 341 aa8.24□□□□□ -1.09
HMGCS1-204ENST00000507293 TMEM128Q5BJH2 165 aa8.24□□□□□ -1.09
HMGCS1-204ENST00000507293 FAM222AQ5U5X8 452 aa8.24□□□□□ -1.09
HMGCS1-204ENST00000507293 EBLN2Q6P2I7 272 aa8.24□□□□□ -1.09
HMGCS1-204ENST00000507293 SLC25A32Q9H2D1 315 aa8.24□□□□□ -1.09
HMGCS1-204ENST00000507293 DKK2Q9UBU2 259 aa8.24□□□□□ -1.09
HMGCS1-204ENST00000507293 M0R2N4 97 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 MED6O75586 246 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 SLC25A6P12236 298 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 PSG9Q00887 426 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 PYDC2Q56P42 97 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 FAM78BQ5VT40 261 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 SPATA31B1PQ5VZV4 182 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 C1orf158Q8N1D5 194 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 TOMM5Q8N4H5 51 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 LRTM2Q8N967 370 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 C16orf92Q96LL3 132 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 C20orf173Q96LM9 149 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 C7orf50Q9BRJ6 194 aaKnown RBP8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 NIPSNAP3BQ9BS92 247 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 MAGT1Q9H0U3 335 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 SLC25A22Q9H936 323 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 GOLT1BQ9Y3E0 138 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 KIAA1109Q2LD37 5005 aa8.23□□□□□ -1.09
HMGCS1-204ENST00000507293 NACAE9PAV3 2078 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 A0A0J9YX75 114 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 TEX48A0A1B0GUV7 120 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 LOC102723971A0A1B0GUV8 181 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 A0A1B0GVY2 172 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 PRSS46E5RG02 174 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 WRBO00258 174 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 SYNGR2O43760 224 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 SFT2D2O95562 160 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 HBE1P02100 147 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 HTN3P15516 51 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 GALR1P47211 349 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 MEOX2P50222 304 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 AP3S2P59780 193 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 PPP1R1AQ13522 171 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 SAMD13Q5VXD3 122 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 UBE2DNLQ8IWF7 75 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 CIB3Q96Q77 187 aaPredicted RBP8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 RPRMQ9NS64 109 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 PLA2G2EQ9NZK7 142 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 DOK5Q9P104 306 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 TMED3Q9Y3Q3 217 aa8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 YTHDF2Q9Y5A9 579 aaKnown RBP8.22□□□□□ -1.09
HMGCS1-204ENST00000507293 HECTD4Q9Y4D8 3996 aa8.21□□□□□ -1.09
HMGCS1-204ENST00000507293 PRSS29PA6NIE9 313 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 ZNF98A6NK75 572 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 H3BP45 60 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 RTL8CO15255 209 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 CFDP00746 253 aaPredicted RBP8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 HOXB5P09067 269 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 ORM2P19652 201 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 GATA2P23769 480 aaPredicted RBP8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 RPP30P78346 268 aaKnown RBP8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 AKR1C1Q04828 323 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 RRN3P1Q2M238 152 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 SPANXN5Q5MJ07 72 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 SPANXN2Q5MJ10 180 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 GGNBP1Q5YKI7 109 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 TMEM182Q6ZP80 229 aaPredicted RBP8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 BPIFCQ8NFQ6 507 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 FAM210BQ96KR6 192 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 C17orf77Q96MU5 243 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 SLC25A21Q9BQT8 299 aaPredicted RBP8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 RSG1Q9BU20 258 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 SLC45A2Q9UMX9 530 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 V9GYH0 126 aa8.21□□□□□ -1.1
HMGCS1-204ENST00000507293 IGLV2-18A0A075B6J9 118 aa8.2□□□□□ -1.1
HMGCS1-204ENST00000507293 A8MTW9 85 aa8.2□□□□□ -1.1
HMGCS1-204ENST00000507293 IFNA21P01568 189 aa8.2□□□□□ -1.1
HMGCS1-204ENST00000507293 OXA1LQ15070 435 aa8.2□□□□□ -1.1
HMGCS1-204ENST00000507293 AMTNQ6UX39 209 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms