RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 EBLN2Q6P2I7 272 aa10.44□□□□□ -0.74
HMGCS1-203ENST00000507004 BPIFCQ8NFQ6 507 aa10.44□□□□□ -0.74
HMGCS1-203ENST00000507004 OR4D5Q8NGN0 318 aa10.44□□□□□ -0.74
HMGCS1-203ENST00000507004 RNF126Q9BV68 326 aa10.44□□□□□ -0.74
HMGCS1-203ENST00000507004 SAV1Q9H4B6 383 aaPredicted RBP10.44□□□□□ -0.74
HMGCS1-203ENST00000507004 STRAPQ9Y3F4 350 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-203ENST00000507004 CENPXA8MT69 81 aa10.43□□□□□ -0.74
HMGCS1-203ENST00000507004 WRBO00258 174 aa10.43□□□□□ -0.74
HMGCS1-203ENST00000507004 IFNA21P01568 189 aa10.43□□□□□ -0.74
HMGCS1-203ENST00000507004 TRIQKQ629K1 86 aa10.43□□□□□ -0.74
HMGCS1-203ENST00000507004 LINC00052Q96N35 136 aa10.43□□□□□ -0.74
HMGCS1-203ENST00000507004 RPRMQ9NS64 109 aa10.43□□□□□ -0.74
HMGCS1-203ENST00000507004 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
HMGCS1-203ENST00000507004 XCL2Q9UBD3 114 aa10.43□□□□□ -0.74
HMGCS1-203ENST00000507004 HOXB5P09067 269 aa10.42□□□□□ -0.74
HMGCS1-203ENST00000507004 PAX9P55771 341 aa10.42□□□□□ -0.74
HMGCS1-203ENST00000507004 OR2F1Q13607 317 aa10.42□□□□□ -0.74
HMGCS1-203ENST00000507004 ZNF705AQ6ZN79 300 aaPredicted RBP10.42□□□□□ -0.74
HMGCS1-203ENST00000507004 OR1B1Q8NGR6 318 aa10.42□□□□□ -0.74
HMGCS1-203ENST00000507004 C7orf50Q9BRJ6 194 aaKnown RBP10.42□□□□□ -0.74
HMGCS1-203ENST00000507004 TMEM147Q9BVK8 224 aa10.42□□□□□ -0.74
HMGCS1-203ENST00000507004 APLNQ9ULZ1 77 aa10.42□□□□□ -0.74
HMGCS1-203ENST00000507004 ELOA3CA0A087WX78 387 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 SOCS3O14543 225 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 NDUFB6O95139 128 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 AMBPP02760 352 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 ID3Q02535 119 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 AKR1C1Q04828 323 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 SPANXN5Q5MJ07 72 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 Q6ZTC4 211 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 TMEM144Q7Z5S9 345 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 FAM210BQ96KR6 192 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 SRRQ9GZT4 340 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 GOLT1BQ9Y3E0 138 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 RFNGQ9Y644 331 aa10.41□□□□□ -0.74
HMGCS1-203ENST00000507004 C9orf170A2RU37 121 aa10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 ZNF705FA8MVS1 300 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 PRSS46E5RG02 174 aa10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 FNDC10F2Z333 226 aa10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 ZNF705DP0CH99 300 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 ZNF705BP0CI00 300 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 SELENOTP62341 195 aa10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 PSG9Q00887 426 aa10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 RPP25LQ8N5L8 163 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 C16orf92Q96LL3 132 aa10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 WDR12Q9GZL7 423 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 MAGT1Q9H0U3 335 aa10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 RBM38Q9H0Z9 239 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-203ENST00000507004 IGHV4-4A0A075B6R2 117 aa10.39□□□□□ -0.75
HMGCS1-203ENST00000507004 IGKV1OR2-108A0A075B7D4 117 aa10.39□□□□□ -0.75
HMGCS1-203ENST00000507004 DEFB131BA0A096LNP1 70 aa10.39□□□□□ -0.75
HMGCS1-203ENST00000507004 ZNF98A6NK75 572 aa10.39□□□□□ -0.75
HMGCS1-203ENST00000507004 DEDDO75618 318 aa10.39□□□□□ -0.75
HMGCS1-203ENST00000507004 RAP2BP61225 183 aa10.39□□□□□ -0.75
HMGCS1-203ENST00000507004 OR4B1Q8NGF8 309 aa10.39□□□□□ -0.75
HMGCS1-203ENST00000507004 DUSP14O95147 198 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 HBE1P02100 147 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 IL5P05113 134 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 P0DMU3 169 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 FAM231AP0DMU4 169 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 FAM231CP0DMU5 169 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 RPL7P18124 248 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 ORM2P19652 201 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 TAS2R30P59541 319 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 B2MP61769 119 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 C12orf74Q32Q52 190 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 ACOT7LQ6ZUV0 252 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 SMIM8Q96KF7 97 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 PSENENQ9NZ42 101 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 DOK5Q9P104 306 aa10.38□□□□□ -0.75
HMGCS1-203ENST00000507004 A0A0J9YX75 114 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 OR4E1P0C645 316 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 PLP1P60201 277 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 DLK1P80370 383 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 OXA1LQ15070 435 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 C4orf46Q504U0 113 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 PXDC1Q5TGL8 231 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 GDF5OSQ5U4N7 250 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 RSG1Q9BU20 258 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 SLC25A32Q9H2D1 315 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 SLC25A22Q9H936 323 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 NPVFQ9HCQ7 196 aa10.37□□□□□ -0.75
HMGCS1-203ENST00000507004 SMCO3A2RU48 225 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 A8MTW9 85 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 H3BP45 60 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 TSC22D2O75157 780 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 HYPMO75409 117 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 IGKV3-20P01619 116 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 POLR2GP62487 172 aaKnown RBP eCLIP10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 FAM78BQ5VT40 261 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 CYP2G1PQ6ZSU1 146 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 ZNF709Q8N972 641 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 OR10P1Q8NGE3 313 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 MGAT4CQ9UBM8 478 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 HIGD1AQ9Y241 93 aa10.36□□□□□ -0.75
HMGCS1-203ENST00000507004 K7EPK0 472 aa10.35□□□□□ -0.75
HMGCS1-203ENST00000507004 ADAP1O75689 374 aa10.35□□□□□ -0.75
HMGCS1-203ENST00000507004 BAK1Q16611 211 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms