RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 LRRC37A5PQ49AS3 106 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 SPATA31B1PQ5VZV4 182 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 FAM90A2PQ658T7 463 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 C16orf54Q6UWD8 224 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 OR1B1Q8NGR6 318 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 SCGB1C1Q8TD33 95 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 GNPNAT1Q96EK6 184 aaPredicted RBP6.4□□□□□ -1.38
PDGFC-205ENST00000506880 WDR89Q96FK6 387 aaPredicted RBP6.4□□□□□ -1.38
PDGFC-205ENST00000506880 PSMG3Q9BT73 122 aaPredicted RBP6.4□□□□□ -1.38
PDGFC-205ENST00000506880 C20orf24Q9BUV8 137 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 OR5AC2Q9NZP5 309 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 MRPL36Q9P0J6 103 aaKnown RBP6.4□□□□□ -1.38
PDGFC-205ENST00000506880 TNFSF18Q9UNG2 199 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 IGHV3-21A0A0B4J1V1 117 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 SMCO3A2RU48 225 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 ZNF253O75346 499 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 CCNKO75909 580 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 GP9P14770 177 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 DEFA5Q01523 94 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 MLANAQ16655 118 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 GUK1Q16774 197 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 TM4SF20Q53R12 229 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 OXLD1Q5BKU9 147 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 BTNL8Q6UX41 500 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 HAPLN4Q86UW8 402 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 OR2G3Q8NGZ4 309 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 GLMPQ8WWB7 406 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 ZNF414Q96IQ9 312 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 HYLS1Q96M11 299 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 GGTLC1Q9BX51 225 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 NPCDR1Q9BY65 106 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 MRPL32Q9BYC8 188 aaKnown RBP6.39□□□□□ -1.39
PDGFC-205ENST00000506880 WDR61Q9GZS3 305 aaKnown RBP6.39□□□□□ -1.39
PDGFC-205ENST00000506880 DNAJC4Q9NNZ3 241 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 MLXQ9UH92 298 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 HIGD1AQ9Y241 93 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 S4R3C0 116 aa6.39□□□□□ -1.39
PDGFC-205ENST00000506880 G3V4G9 280 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 LINC00869P0C866 280 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 B2MP61769 119 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 SNRPD3P62318 126 aaKnown RBP6.38□□□□□ -1.39
PDGFC-205ENST00000506880 NHLH2Q02577 135 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 ARL16Q0P5N6 197 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 PDE6HQ13956 83 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 CD300EQ496F6 205 aaPredicted RBP6.38□□□□□ -1.39
PDGFC-205ENST00000506880 TMEM41BQ5BJD5 291 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 ADAMTSL5Q6ZMM2 481 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 TMEM217Q8N7C4 229 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 CLUHP3Q96NS8 147 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 SHANK2-AS3Q9BTD1 123 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 SLC39A9Q9NUM3 307 aa6.38□□□□□ -1.39
PDGFC-205ENST00000506880 DNAH3Q8TD57 4116 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 A0A087X0K7 114 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 UBE2L5PA0A1B0GUS4 154 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 ZNF98A6NK75 572 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 H3BRN7 92 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 ISLRO14498 428 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 COX7A2P2O60397 106 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 IGHV3-48P01763 117 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 C1QBP02746 253 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 FGF7P21781 194 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 ID1P41134 155 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 TAS2R45P59539 299 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 LYZP61626 148 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 ZNF90Q03938 601 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 USF2Q15853 346 aaPredicted RBP6.37□□□□□ -1.39
PDGFC-205ENST00000506880 EIF5AL1Q6IS14 154 aaKnown RBP6.37□□□□□ -1.39
PDGFC-205ENST00000506880 SIGLEC15Q6ZMC9 328 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 TCF24Q7RTU0 167 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 AKAP14Q86UN6 197 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 BPIFA4PQ86YQ2 179 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 TMEM61Q8N0U2 210 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 OR8I2Q8N0Y5 310 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 ARL6IP6Q8N6S5 226 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 PPP1R14BQ96C90 147 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 MGST2Q99735 147 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 SLC25A39Q9BZJ4 359 aaPredicted RBP6.37□□□□□ -1.39
PDGFC-205ENST00000506880 ARV1Q9H2C2 271 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 NRN1Q9NPD7 142 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 TMEM14CQ9P0S9 112 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 SMAD5-AS1Q9Y6J3 95 aa6.37□□□□□ -1.39
PDGFC-205ENST00000506880 FXYD6-FXYD2A0A087WZ82 144 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 KIR2DL5BA0A0G2JN68 375 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 KIR2DL5BA0A0G2JPC4 375 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 ZNF785A8K8V0 405 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 DNASE2O00115 360 aaPredicted RBP6.36□□□□□ -1.39
PDGFC-205ENST00000506880 UBE2CO00762 179 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 OR5G3P0C626 314 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 NHLRC4P0CG21 123 aaPredicted RBP6.36□□□□□ -1.39
PDGFC-205ENST00000506880 PSMB3P49720 205 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 ACOT6Q3I5F7 207 aaPredicted RBP6.36□□□□□ -1.39
PDGFC-205ENST00000506880 C10orf113Q5VZT2 155 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 LCN15Q6UWW0 184 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 KIR2DL5AQ8N109 375 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 KCNRGQ8N5I3 272 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 KIR2DL5BQ8NHK3 375 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 ST8SIA2Q92186 375 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 SLC50A1Q9BRV3 221 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 MFFQ9GZY8 342 aa6.36□□□□□ -1.39
PDGFC-205ENST00000506880 PXMP4Q9Y6I8 212 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms