RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 SNRPCP09234 159 aaKnown RBP6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 KRTAP10-11P60412 298 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 ATP6V1FQ16864 119 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 PATE2Q6UY27 113 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 HSD17B11Q8NBQ5 300 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 OR1B1Q8NGR6 318 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 RNF125Q96EQ8 232 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 UHRF2Q96PU4 802 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 RNF2Q99496 336 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 RHPN1-AS1Q9BWJ2 59 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 WDR61Q9GZS3 305 aaKnown RBP6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 ARL6Q9H0F7 186 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 SMPXQ9UHP9 88 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 UFC1Q9Y3C8 167 aa6.68□□□□□ -1.34
SCAMP1-202ENST00000506858 MEGF8Q7Z7M0 2845 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 IGHV7-4-1A0A0J9YVY3 117 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 FNDC10F2Z333 226 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 CHEK1O14757 476 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 OR5G3P0C626 314 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 DEFB114Q30KQ6 69 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 LGALSLQ3ZCW2 172 aaPredicted RBP6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 CD300EQ496F6 205 aaPredicted RBP6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 MORN5Q5VZ52 161 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 GBGT1Q8N5D6 347 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 DYNLRB2Q8TF09 96 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 NPCDR1Q9BY65 106 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 SH3BGRL3Q9H299 93 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 DAZ1Q9NQZ3 744 aaKnown RBP6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 CYTL1Q9NRR1 136 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 PEMTQ9UBM1 199 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 PXMP4Q9Y6I8 212 aa6.67□□□□□ -1.34
SCAMP1-202ENST00000506858 TRAV5A0A0B4J249 113 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 A8MWP6 167 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 DFFBO76075 338 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 IFNA5P01569 189 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 C1QBP02746 253 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 PRB4P10163 310 aaPredicted RBP6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 NPPCP23582 126 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 TFPI2P48307 235 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 ELLP55199 621 aaPredicted RBP6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 OPCMLQ14982 345 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 C9orf66Q5T8R8 295 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 SPATA31B1PQ5VZV4 182 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 TMUB2Q71RG4 321 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 WFDC3Q8IUB2 231 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 SCGB1C1Q8TD33 95 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 TMEM37Q8WXS4 190 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 METTL26Q96S19 204 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 SCRT1Q9BWW7 348 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 KRTAP4-2Q9BYR5 136 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 RABAC1Q9UI14 185 aa6.66□□□□□ -1.34
SCAMP1-202ENST00000506858 HMSDA8MTL9 139 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 K7EMT4 169 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 HYPMO75409 117 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 SCGB2A1O75556 95 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 C8orf88P0DMB2 117 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 CRYBB3P26998 211 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 ZFP69Q49AA0 526 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 LAMTOR1Q6IAA8 161 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 TMEM61Q8N0U2 210 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 KCNRGQ8N5I3 272 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 PPP1R14BQ96C90 147 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 PRR25Q96S07 402 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 GINS3Q9BRX5 216 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 VSIRQ9H7M9 311 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 SLC25A22Q9H936 323 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 SLC39A9Q9NUM3 307 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 MRPL27Q9P0M9 148 aaKnown RBP6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 U3KQE9 123 aa6.65□□□□□ -1.34
SCAMP1-202ENST00000506858 ZNF785A8K8V0 405 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 BOLA2-SMG1P6H3BVE0 249 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 PFDN1O60925 122 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 IGLV1-51P01701 117 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 FABP1P07148 127 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 HNRNPCP07910 306 aaKnown RBP eCLIP6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 ATP6V0CP27449 155 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 B2MP61769 119 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 RPL11P62913 178 aaKnown RBP6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 RAB31Q13636 194 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 GUCA2BQ16661 112 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 FFAR4Q5NUL3 377 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 TCF24Q7RTU0 167 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 ZNF709Q8N972 641 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 ARV1Q9H2C2 271 aa6.65□□□□□ -1.35
SCAMP1-202ENST00000506858 ZNF98A6NK75 572 aa6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 H3BTX0 84 aa6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 BUB3O43684 328 aa6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 COX7A2P2O60397 106 aa6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 RPL29P47914 159 aaKnown RBP6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 SELENOTP62341 195 aa6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 C9orf62Q8N4C0 152 aa6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 ARPC5LQ9BPX5 153 aa6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 MCRIP2Q9BUT9 160 aaKnown RBP6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 SLC25A39Q9BZJ4 359 aaPredicted RBP6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 HIGD1AQ9Y241 93 aa6.64□□□□□ -1.35
SCAMP1-202ENST00000506858 HMGB3O15347 200 aaKnown RBP6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 RAB2AP61019 212 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 BEAN1Q3B7T3 259 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 FAM90A2PQ658T7 463 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 IGFL4Q6B9Z1 124 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms