RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 PXDC1Q5TGL8 231 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 MIC13Q5XKP0 118 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 LCN12Q6JVE5 192 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 C16orf54Q6UWD8 224 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 TMEM61Q8N0U2 210 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 SELENOKQ9Y6D0 94 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 IGHV3-66A0A0C4DH42 116 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 TSPAN4O14817 238 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 IFNA5P01569 189 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 CD5P06127 495 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 ORM2P19652 201 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 ZNF345Q14585 488 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 PATE2Q6UY27 113 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 AKAP14Q86UN6 197 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 OR1B1Q8NGR6 318 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 GLMPQ8WWB7 406 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 NARS2Q96I59 477 aaKnown RBP9.66□□□□□ -0.86
TCOF1-210ENST00000506767 MFFQ9GZY8 342 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 TMEM231Q9H6L2 316 aa9.66□□□□□ -0.86
TCOF1-210ENST00000506767 ZNF256Q9Y2P7 627 aaPredicted RBP9.66□□□□□ -0.86
TCOF1-210ENST00000506767 NOTCH3Q9UM47 2321 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 HYPMO75409 117 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 C1QBP02746 253 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 GP9P14770 177 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 AP2S1P53680 142 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-210ENST00000506767 B2MP61769 119 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 ZNF266Q14584 549 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 C1orf194Q5T5A4 169 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 LAMTOR1Q6IAA8 161 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 TMEM37Q8WXS4 190 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 GRAMD2BQ96HH9 432 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 ARL6Q9H0F7 186 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 SLC39A9Q9NUM3 307 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 PFDN2Q9UHV9 154 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 PXMP4Q9Y6I8 212 aa9.65□□□□□ -0.86
TCOF1-210ENST00000506767 ELOA3CA0A087WX78 387 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-210ENST00000506767 ZNF98A6NK75 572 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 C17orf112F2Z3M2 114 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 H3BRN7 92 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 TAAR5O14804 337 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 CXCL2P19875 107 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 CD300CQ08708 224 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 Q6ZRG5 221 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 RBPMS2Q6ZRY4 209 aaKnown RBP9.64□□□□□ -0.87
TCOF1-210ENST00000506767 TCF24Q7RTU0 167 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 KCNRGQ8N5I3 272 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 SCGB1C1Q8TD33 95 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 SPAG8Q99932 426 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-210ENST00000506767 SHANK2-AS3Q9BTD1 123 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 RSG1Q9BU20 258 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 SLC25A39Q9BZJ4 359 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-210ENST00000506767 ARV1Q9H2C2 271 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 DOK5Q9P104 306 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 HIGD1AQ9Y241 93 aa9.64□□□□□ -0.87
TCOF1-210ENST00000506767 A0A0D9SG52 128 aa9.63□□□□□ -0.87
TCOF1-210ENST00000506767 OR5G3P0C626 314 aa9.63□□□□□ -0.87
TCOF1-210ENST00000506767 S100A7P31151 101 aa9.63□□□□□ -0.87
TCOF1-210ENST00000506767 ZNF709Q8N972 641 aa9.63□□□□□ -0.87
TCOF1-210ENST00000506767 UHRF2Q96PU4 802 aa9.63□□□□□ -0.87
TCOF1-210ENST00000506767 PRR25Q96S07 402 aa9.63□□□□□ -0.87
TCOF1-210ENST00000506767 DNAJC4Q9NNZ3 241 aa9.63□□□□□ -0.87
TCOF1-210ENST00000506767 CYTL1Q9NRR1 136 aa9.63□□□□□ -0.87
TCOF1-210ENST00000506767 KCNIP2Q9NS61 270 aa9.63□□□□□ -0.87
TCOF1-210ENST00000506767 AURKAIP1Q9NWT8 199 aaPredicted RBP9.63□□□□□ -0.87
TCOF1-210ENST00000506767 TIMM9Q9Y5J7 89 aa9.63□□□□□ -0.87
TCOF1-210ENST00000506767 HELTA6NFD8 242 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 GUCA2BQ16661 112 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 C10orf113Q5VZT2 155 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 RPL7L1Q6DKI1 246 aaKnown RBP9.62□□□□□ -0.87
TCOF1-210ENST00000506767 SIGLEC15Q6ZMC9 328 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 S100A7AQ86SG5 101 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 OR1L4Q8NGR5 311 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 GATAD1Q8WUU5 269 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 PPP1R14BQ96C90 147 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 HYLS1Q96M11 299 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 PFDN5Q99471 154 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 SCRT1Q9BWW7 348 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 RFNGQ9Y644 331 aa9.62□□□□□ -0.87
TCOF1-210ENST00000506767 BORCS7-ASMTA0A0B4J1R7 106 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 TRAV2A0A0B4J234 112 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 COX7A2P2O60397 106 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 JTBO76095 146 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 PRB2P02812 416 aaPredicted RBP9.61□□□□□ -0.87
TCOF1-210ENST00000506767 ATP6V0CP27449 155 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 LGALSLQ3ZCW2 172 aaPredicted RBP9.61□□□□□ -0.87
TCOF1-210ENST00000506767 GCSAMLQ5JQS6 135 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 MORN5Q5VZ52 161 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 Q8N1Y9 231 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 GPR82Q96P67 336 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 ARPC5LQ9BPX5 153 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 PSMG3Q9BT73 122 aaPredicted RBP9.61□□□□□ -0.87
TCOF1-210ENST00000506767 SLC25A32Q9H2D1 315 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 MS4A6AQ9H2W1 248 aa9.61□□□□□ -0.87
TCOF1-210ENST00000506767 K7EIL1 84 aa9.6□□□□□ -0.87
TCOF1-210ENST00000506767 MRPS12O15235 138 aaKnown RBP9.6□□□□□ -0.87
TCOF1-210ENST00000506767 PAFAH1B2P68402 229 aa9.6□□□□□ -0.87
TCOF1-210ENST00000506767 LEMD1Q68G75 181 aa9.6□□□□□ -0.87
TCOF1-210ENST00000506767 TMUB2Q71RG4 321 aa9.6□□□□□ -0.87
TCOF1-210ENST00000506767 OR8I2Q8N0Y5 310 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms