RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SAT2Q96F10 170 aaPredicted RBP6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 ZNF355PQ9NSJ1 428 aa6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 SLC39A9Q9NUM3 307 aa6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 CAMLGP49069 296 aa6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 TM4SF20Q53R12 229 aa6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 BTNL8Q6UX41 500 aa6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 SLC25A2Q9BXI2 301 aa6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 MRPL32Q9BYC8 188 aaKnown RBP6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 SCGB2A1O75556 95 aa6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 DPPA3Q6W0C5 159 aa6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 C11orf44Q8N8P7 122 aa6.2□□□□□ -1.42
CDC42SE2-208ENST00000505065 IGHV3-21A0A0B4J1V1 117 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 CAV2P51636 162 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 ZNF266Q14584 549 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 Q8WTZ3 238 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 ST8SIA2Q92186 375 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 KCNIP2Q9NS61 270 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 K7EQG2 157 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 IGHV3-48P01763 117 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 SEC11BP0C7V7 166 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 TMUB2Q71RG4 321 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 BPIFCQ8NFQ6 507 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 ARPC5LQ9BPX5 153 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 SLC25A39Q9BZJ4 359 aaPredicted RBP6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 DNAH6Q9C0G6 4158 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 LYSTQ99698 3801 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 A0A1W2PRX2 142 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 JTBO76095 146 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 MORN5Q5VZ52 161 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 GATAD1Q8WUU5 269 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 ELOVL1Q9BW60 279 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 COL7A1Q02388 2944 aa6.19□□□□□ -1.42
CDC42SE2-208ENST00000505065 UBE2L5PA0A1B0GUS4 154 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 LRRC37A5PQ49AS3 106 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 RNF2Q99496 336 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 PXMP4Q9Y6I8 212 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 TRAV8-2A0A0B4J237 113 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 ZNF726P1Q15940 193 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 PHYHIPLQ96FC7 376 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 ACY3Q96HD9 319 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 FAM19A4Q96LR4 140 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 PPP1R14DQ9NXH3 145 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 RABAC1Q9UI14 185 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 IGLL1P15814 213 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 FGF7P21781 194 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 MEOX2P50222 304 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 OR1B1Q8NGR6 318 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 MRPL53Q96EL3 112 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 OR5B12Q96R08 314 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 SPAG8Q99932 426 aaPredicted RBP6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 RNF24Q9Y225 148 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 ARL2-SNX15V9GYD0 113 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 TRAV1-1A0A0B4J248 108 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 IZUMO1RA6ND01 250 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 RPL7L1Q6DKI1 246 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 MFFQ9GZY8 342 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 SLC25A32Q9H2D1 315 aa6.18□□□□□ -1.42
CDC42SE2-208ENST00000505065 ZNF98A6NK75 572 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 NUDT19A8MXV4 375 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 ATP6V0CP27449 155 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 PFDN5Q99471 154 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 G3V4G9 280 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 IL4P05112 153 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 SAMD13Q5VXD3 122 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 OR1L4Q8NGR5 311 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 MBD3L1Q8WWY6 194 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 GNPNAT1Q96EK6 184 aaPredicted RBP6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 METTL26Q96S19 204 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 CD33P20138 364 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 CD300EQ496F6 205 aaPredicted RBP6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 MIC13Q5XKP0 118 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 SSX7Q7RTT5 188 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 INO80EQ8NBZ0 244 aaPredicted RBP6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 FXYD5Q96DB9 178 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 RHPN1-AS1Q9BWJ2 59 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 TMEM231Q9H6L2 316 aa6.17□□□□□ -1.42
CDC42SE2-208ENST00000505065 PF4P02776 101 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 PDE6HQ13956 83 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 TMEM217Q8N7C4 229 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 DPF1Q92782 380 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 DNAJC4Q9NNZ3 241 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 ZMAT5Q9UDW3 170 aaKnown RBP6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 HYPMO75409 117 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 NDUFB4O95168 129 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 NPPCP23582 126 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 AKR1C1Q04828 323 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 LCN12Q6JVE5 192 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 RPP25LQ8N5L8 163 aaKnown RBP6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 SH3BGRL3Q9H299 93 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 FUT9Q9Y231 359 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 A0A1W2PS18 150 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 ZFP92A6NM28 416 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 C17orf112F2Z3M2 114 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 ARPC5O15511 151 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 STAG3L2P0CL84 134 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 STAG3L3P0CL85 134 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 GATA2P23769 480 aaPredicted RBP6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 PSMB3P49720 205 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 TMEM41BQ5BJD5 291 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms