RNA–Protein interactions for RNA: ENST00000504881.1

SRFBP1-202, Transcript of serum response factor binding protein 1, humanhuman

TSL 3

Gene SRFBP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-202ENST00000504881 ERBINQ96RT1 1412 aa0.77□□□□□ -2.29
SRFBP1-202ENST00000504881 RRBP1Q9P2E9 1410 aaKnown RBP0.77□□□□□ -2.29
SRFBP1-202ENST00000504881 ZNF518AQ6AHZ1 1483 aa0.77□□□□□ -2.29
SRFBP1-202ENST00000504881 KIF1BO60333 1816 aa0.77□□□□□ -2.29
SRFBP1-202ENST00000504881 SPEF2Q9C093 1822 aa0.77□□□□□ -2.29
SRFBP1-202ENST00000504881 MYH7P12883 1935 aa0.77□□□□□ -2.29
SRFBP1-202ENST00000504881 POLEQ07864 2286 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 MYOFQ9NZM1 2061 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 CITO14578 2027 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 ECM29Q5VYK3 1845 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 MED1Q15648 1581 aaPredicted RBP0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 FAM135AQ9P2D6 1515 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 SOGA1O94964 1423 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 FAM135BQ49AJ0 1406 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 SMG6Q86US8 1419 aaKnown RBP0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 IGKV1-9A0A0C4DH69 117 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 TMEM212A6NML5 194 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 C1orf196B1AJZ1 125 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 FAM25AB3EWG3 89 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 FAM25CB3EWG5 89 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 FAM25GB3EWG6 89 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 TMEM238C9JI98 176 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 ATP6V1G2-DDX39BF2Z307 99 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 TSTD3H0UI37 97 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 HMGB3O15347 200 aaKnown RBP0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 BANF1O75531 89 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 IFNA7P01567 189 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 S100A8P05109 93 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 SMIM6P0DI80 62 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 COX4I1P13073 169 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 SRIP30626 198 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 ATP5G3P48201 142 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 DEFA3P59666 94 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 EIF5AP63241 154 aaKnown RBP0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 RPL19P84098 196 aaKnown RBP0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 PRB3Q04118 309 aaPredicted RBP0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 POU6F1Q14863 301 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 RRN3P1Q2M238 152 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 C10orf55Q5SWW7 151 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 TRIQKQ629K1 86 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 UNQ6190/PRO20217Q6UXQ8 127 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 TMED4Q7Z7H5 227 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 IFT20Q8IY31 132 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 Q8N2B8 174 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 STX19Q8N4C7 294 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 GRPEL2Q8TAA5 225 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 NEK7Q8TDX7 302 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 AQP3Q92482 292 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 PRRT1Q99946 306 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 TCEAL7Q9BRU2 100 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 SLC50A1Q9BRV3 221 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 DDA1Q9BW61 102 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 SPANXA1Q9NS26 97 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 FAIMQ9NVQ4 179 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 HS3ST2Q9Y278 367 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 SLC35A3Q9Y2D2 325 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 ASB4Q9Y574 426 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 NUBP2Q9Y5Y2 271 aa0.76□□□□□ -2.29
SRFBP1-202ENST00000504881 CEP152O94986 1710 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 EIF4G3O43432 1585 aaKnown RBP0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 NCAPD3P42695 1498 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 CLIP1P30622 1438 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 MIA2Q96PC5 1412 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 CACNA1BQ00975 2339 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 RFX7Q2KHR2 1363 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 ANKRD36BQ8N2N9 1353 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 TRAV14DV4A0A0A6YYC5 116 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 TRAV1-1A0A0B4J248 108 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 TPST1O60507 370 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 SULT1C4O75897 302 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 ATG12O94817 140 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 PROSCO94903 275 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 FAM107AO95990 144 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 IFNA21P01568 189 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 IFNA4P05014 189 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 CRHP06850 196 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 ASAH2BP0C7U1 165 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 SCGB1A1P11684 91 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 RNASE3P12724 160 aaKnown RBP0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 OGNP20774 298 aaKnown RBP0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 SDC4P31431 198 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 RNASE4P34096 147 aaKnown RBP0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 SRP14P37108 136 aaKnown RBP0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 RHOBP62745 196 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 TFAMQ00059 246 aaKnown RBP0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 PDE6HQ13956 83 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 DEFB115Q30KQ5 88 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 RPL13AP3Q6NVV1 102 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 CTAGE3PQ8IX95 158 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 LINC00311Q8N616 119 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 OR2T10Q8NGZ9 312 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 OR10J5Q8NHC4 309 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 C1orf54Q8WWF1 131 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 TMEM203Q969S6 136 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 SLAMF6Q96DU3 332 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 ZHX1-C8orf76Q96EF9 292 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 PPP3R2Q96LZ3 170 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 YPEL2Q96QA6 119 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 PFDN5Q99471 154 aa0.75□□□□□ -2.29
SRFBP1-202ENST00000504881 C12orf57Q99622 126 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms