RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 RND3P61587 244 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 OR5I1Q13606 314 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 OR2F1Q13607 317 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 C2orf83Q53S99 150 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 RNASE10Q5GAN6 216 aaKnown RBP4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 SPATA31B1PQ5VZV4 182 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 OR8I2Q8N0Y5 310 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 CCDC71LQ8N9Z2 235 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 GPX8Q8TED1 209 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 TMEM170AQ8WVE7 144 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 FRZBQ92765 325 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 C16orf92Q96LL3 132 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 CLUHP3Q96NS8 147 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 RPRMQ9NS64 109 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 ZNF586Q9NXT0 402 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 PTTG2Q9NZH5 202 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 PFDN2Q9UHV9 154 aa4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 DMBT1Q9UGM3 2413 aaPredicted RBP4.8□□□□□ -1.64
NPIPB3-203ENST00000504841 TRAV12-2A0A075B6T6 113 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 A0A0J9YY99 117 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 OR5AC1P0C628 307 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 ELK1P19419 428 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 AZU1P20160 251 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 UCP1P25874 307 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 RPS19P39019 145 aaKnown RBP4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 CNN1P51911 297 aaKnown RBP4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 LSM3P62310 102 aaKnown RBP4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 SUPT4H1P63272 117 aaKnown RBP4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 ZNF90Q03938 601 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 KLF9Q13886 244 aaPredicted RBP4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 MEF2DQ14814 521 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 SCGB2B2Q4G0G5 96 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 OR8G2PQ6IF36 304 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 AMTNQ6UX39 209 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 LYPD1Q8N2G4 141 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 ARRDC1Q8N5I2 433 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 OR11H7Q8NGC8 314 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 OR13C8Q8NGS7 320 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 ZNF486Q96H40 463 aaPredicted RBP4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 C18orf15Q96N68 181 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 SLC25A22Q9H936 323 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 MDFICQ9P1T7 246 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 COMMD3Q9UBI1 195 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 LRP1BQ9NZR2 4599 aa4.79□□□□□ -1.64
NPIPB3-203ENST00000504841 TRAV26-1A0A087WT03 109 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 SMIM31A0A1B0GVY4 71 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 PLAC8L1A1L4L8 177 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 CBY3A6NI87 242 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 PRB4P10163 310 aaPredicted RBP4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 ZNF182P17025 639 aaPredicted RBP4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 XGP55808 180 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 LINC00315P59091 139 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 HAMPP81172 84 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 FGL1Q08830 312 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 C1orf194Q5T5A4 169 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 TMEM268Q5VZI3 342 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 IGFL4Q6B9Z1 124 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 FAM219AQ8IW50 185 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 RNF182Q8N6D2 247 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 OR52E5Q8NH55 327 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 LHFPL5Q8TAF8 219 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 GNPNAT1Q96EK6 184 aaPredicted RBP4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 SLC35E1Q96K37 410 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 LINC01587Q99440 93 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 FUNDC2Q9BWH2 189 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 MRPS26Q9BYN8 205 aaKnown RBP4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 SLC25A39Q9BZJ4 359 aaPredicted RBP4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 SLC25A32Q9H2D1 315 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 Q9H3A6 140 aa4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 NOP10Q9NPE3 64 aaKnown RBP4.78□□□□□ -1.64
NPIPB3-203ENST00000504841 TEX13DA0A0J9YY54 714 aaPredicted RBP4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 SNRPGP15A8MWD9 76 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 BOLA2-SMG1P6H3BVE0 249 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 GABARAPH6UMI1 98 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 CRXO43186 299 aaPredicted RBP4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 DUSP14O95147 198 aaKnown RBP4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 GABARAPO95166 117 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 SMR3BP02814 79 aaPredicted RBP4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 CD3DP04234 171 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 BTF3P20290 206 aaKnown RBP4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 M6PRP20645 277 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 TSPOP30536 169 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 GALR1P47211 349 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 MEOX2P50222 304 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 ERVFC1-1P60608 527 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 RHOBP62745 196 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 HIST1H1AQ02539 215 aaPredicted RBP4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 NMSQ5H8A3 153 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 SAMD13Q5VXD3 122 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 GPR141Q7Z602 305 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 NOXA1Q86UR1 476 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 LHFPL1Q86WI0 220 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 ZNF738Q8NE65 137 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 OR4D10Q8NGI6 311 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 ZFAND1Q8TCF1 268 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 MARCH1Q8TCQ1 289 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 RBPMSQ93062 196 aaKnown RBP4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 BCL7BQ9BQE9 202 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 RSG1Q9BU20 258 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms