RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 IGHV2-70DA0A0C4DH43 119 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 MT-ND6P03923 174 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 SLC25A39Q9BZJ4 359 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-207ENST00000504761 ARHGAP21Q5T5U3 1957 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 ARHGAP32A7KAX9 2087 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 PAX8Q06710 450 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 Q6ZPA2 131 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 PHLDA3Q9Y5J5 127 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 TRAV1-1A0A0B4J248 108 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 OR4X2Q8NGF9 303 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 ZNF418Q8TF45 676 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-207ENST00000504761 ADCYAP1P18509 176 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 SNRPD3P62318 126 aaKnown RBP11.34□□□□□ -0.59
TCOF1-207ENST00000504761 SAPCD1Q5SSQ6 148 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 FAM71F2Q6NXP2 309 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 ZNF562Q6V9R5 426 aa11.34□□□□□ -0.59
TCOF1-207ENST00000504761 TRAV8-1A0A0A6YYK1 113 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 DSCAMO60469 2012 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 CD33P20138 364 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 TCF24Q7RTU0 167 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 PAM16Q9Y3D7 125 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 TBL2Q9Y4P3 447 aaKnown RBP11.33□□□□□ -0.6
TCOF1-207ENST00000504761 C1QL4Q86Z23 238 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 LINC00479Q96M42 142 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 IL36BQ9NZH7 164 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 YTHDF2Q9Y5A9 579 aaKnown RBP11.33□□□□□ -0.6
TCOF1-207ENST00000504761 ATP6V0E1O15342 81 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 CD99P14209 185 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 ASCL2Q99929 193 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 ATG101Q9BSB4 218 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 BEX4Q9NWD9 120 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-207ENST00000504761 CHD3Q12873 2000 aaKnown RBP11.33□□□□□ -0.6
TCOF1-207ENST00000504761 SLC25A16P16260 332 aa11.33□□□□□ -0.6
TCOF1-207ENST00000504761 PKD1L2Q7Z442 2459 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 ZNF98A6NK75 572 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 ELOBQ15370 118 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 FAM74A4Q5TZK3 123 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 LINC01356Q8N9X3 169 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 GOLT1BQ9Y3E0 138 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 C2CD3Q4AC94 2353 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 HIGD1CA8MV81 97 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 M0R381 172 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 M0R3E3 92 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 TAS2R60P59551 318 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 LINC00311Q8N616 119 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 TMEM116Q8NCL8 245 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 Q96MF0 132 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 TRAV20A0A0B4J274 112 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 PF4P02776 101 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 PPIFP30405 207 aaKnown RBP11.32□□□□□ -0.6
TCOF1-207ENST00000504761 TRGV9Q99603 122 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 OTORQ9NRC9 128 aa11.32□□□□□ -0.6
TCOF1-207ENST00000504761 NDUFS8O00217 210 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 KLHDC1Q8N7A1 406 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 EML5Q05BV3 1969 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 IGHV1-69DA0A0B4J2H0 117 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 IGHV4-61A0A0C4DH41 118 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 C9JCJ5 164 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 IGHV1-69P01742 117 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 UTF1Q5T230 341 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 DDB2Q92466 427 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 SZT2Q5T011 3432 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 NDUFB8O95169 186 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 KIAA1549Q9HCM3 1950 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 TEX38Q6PEX7 206 aa11.31□□□□□ -0.6
TCOF1-207ENST00000504761 SSBP4Q9BWG4 385 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-207ENST00000504761 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
TCOF1-207ENST00000504761 FAM120AOSQ5T036 256 aa11.3□□□□□ -0.6
TCOF1-207ENST00000504761 DGAT2L7PQ6IED9 249 aa11.3□□□□□ -0.6
TCOF1-207ENST00000504761 IGKV2-40A0A087WW87 121 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-207ENST00000504761 A0A087WWC5 75 aa11.3□□□□□ -0.6
TCOF1-207ENST00000504761 IGKV2D-40P01614 121 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-207ENST00000504761 IGHV2-5P01817 119 aa11.3□□□□□ -0.6
TCOF1-207ENST00000504761 ZNF726P1Q15940 193 aa11.3□□□□□ -0.6
TCOF1-207ENST00000504761 FAM159AQ6UWV7 190 aa11.3□□□□□ -0.6
TCOF1-207ENST00000504761 FMC1Q96HJ9 113 aa11.3□□□□□ -0.6
TCOF1-207ENST00000504761 NPIPB5A8MRT5 1133 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 J3QKU1 62 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 LINC01551Q86U37 167 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 C5orf30Q96GV9 206 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 TBX15Q96SF7 602 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 RPP21Q9H633 154 aaKnown RBP11.29□□□□□ -0.6
TCOF1-207ENST00000504761 IGHV4-39P01824 125 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 GZMBP10144 247 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
TCOF1-207ENST00000504761 HNRNPA3P51991 378 aaKnown RBP11.29□□□□□ -0.6
TCOF1-207ENST00000504761 HBBP68871 147 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 TMEM183BQ1AE95 376 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 LCNL1Q6ZST4 164 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 RITA1Q96K30 269 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 CXCL1P09341 107 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 ZNF841Q6ZN19 808 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 PSMB11A5LHX3 300 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
TCOF1-207ENST00000504761 IGHV4-30-2A0A087WSY4 118 aa11.28□□□□□ -0.6
TCOF1-207ENST00000504761 IL17RELQ6ZVW7 336 aa11.28□□□□□ -0.6
TCOF1-207ENST00000504761 CIARTQ8N365 385 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-207ENST00000504761 SMIM6P0DI80 62 aa11.28□□□□□ -0.6
TCOF1-207ENST00000504761 FBLN7Q53RD9 439 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms