RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 GPR61Q9BZJ8 451 aa10□□□□□ -0.81
PDLIM7-212ENST00000504380 VSIRQ9H7M9 311 aa10□□□□□ -0.81
PDLIM7-212ENST00000504380 PXMP4Q9Y6I8 212 aa10□□□□□ -0.81
PDLIM7-212ENST00000504380 HYPMO75409 117 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 PRR20EP86478 221 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 PRR20CP86479 221 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 PRR20DP86480 221 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 PRR20BP86481 221 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 PRR20AP86496 221 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 GCSAMLQ5JQS6 135 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 LEMD1Q68G75 181 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 RPL7L1Q6DKI1 246 aaKnown RBP9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 TCF24Q7RTU0 167 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 UHRF2Q96PU4 802 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 PRR25Q96S07 402 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 SLC39A9Q9NUM3 307 aa9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 TECRQ9NZ01 308 aaKnown RBP9.99□□□□□ -0.81
PDLIM7-212ENST00000504380 ZNF785A8K8V0 405 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 HMSDA8MTL9 139 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 MPDU1O75352 247 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 CFDP00746 253 aaPredicted RBP9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 C1QBP02746 253 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 RPL29P47914 159 aaKnown RBP9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 TFPI2P48307 235 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 PLP1P60201 277 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 B2MP61769 119 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 EGFEM1PQ0D2K5 195 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 GUCA2BQ16661 112 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 C16orf54Q6UWD8 224 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 GBGT1Q8N5D6 347 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 KCNRGQ8N5I3 272 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 ZNF709Q8N972 641 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 HSD17B11Q8NBQ5 300 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 NARS2Q96I59 477 aaKnown RBP9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 SCRT1Q9BWW7 348 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 CYTL1Q9NRR1 136 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 HIGD1AQ9Y241 93 aa9.98□□□□□ -0.81
PDLIM7-212ENST00000504380 A0A1W2PS18 150 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 BUB3O43684 328 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 COX7A2P2O60397 106 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 RPL11P62913 178 aaKnown RBP9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 KPRPQ5T749 579 aaPredicted RBP9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 MORN5Q5VZ52 161 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 FAM90A2PQ658T7 463 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 LCN12Q6JVE5 192 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 RBPMS2Q6ZRY4 209 aaKnown RBP9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 WFDC3Q8IUB2 231 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 GLMPQ8WWB7 406 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 TMEM37Q8WXS4 190 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 SLC25A39Q9BZJ4 359 aaPredicted RBP9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 SH3BGRL3Q9H299 93 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 ARV1Q9H2C2 271 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 SLC25A22Q9H936 323 aa9.97□□□□□ -0.81
PDLIM7-212ENST00000504380 TRAV5A0A0B4J249 113 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 ZNF98A6NK75 572 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 C17orf112F2Z3M2 114 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 H3BRN7 92 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 GP9P14770 177 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 NKX2-5P52952 324 aaPredicted RBP9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 LGALSLQ3ZCW2 172 aaPredicted RBP9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 FFAR4Q5NUL3 377 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 Q6ZRG5 221 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 TMUB2Q71RG4 321 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 ARPC5LQ9BPX5 153 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 PARD6GQ9BYG4 376 aaPredicted RBP9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 TMEM231Q9H6L2 316 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 DNAJC4Q9NNZ3 241 aa9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 ZNF256Q9Y2P7 627 aaPredicted RBP9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 PRKDCP78527 4128 aaKnown RBP9.96□□□□□ -0.82
PDLIM7-212ENST00000504380 BORCS7-ASMTA0A0B4J1R7 106 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 A0A0D9SG52 128 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 EIF3GO75821 320 aaKnown RBP eCLIP9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 ATP6V0CP27449 155 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 BMI1P35226 326 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 ZNF266Q14584 549 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 ZNF345Q14585 488 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 ZFP69Q49AA0 526 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 C10orf113Q5VZT2 155 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 SPATA31B1PQ5VZV4 182 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 LAMTOR1Q6IAA8 161 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 LINC00305Q7Z4B0 112 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 OR2K2Q8NGT1 345 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 GRAMD2BQ96HH9 432 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 SHANK2-AS3Q9BTD1 123 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 SLC25A32Q9H2D1 315 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 AURKAIP1Q9NWT8 199 aaPredicted RBP9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 NOTCH1P46531 2555 aa9.95□□□□□ -0.82
PDLIM7-212ENST00000504380 TSPAN4O14817 238 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 SNRPCP09234 159 aaKnown RBP9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 CD7P09564 240 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 PXDC1Q5TGL8 231 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 SIGLEC15Q6ZMC9 328 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 OR8I2Q8N0Y5 310 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 STXBP6Q8NFX7 210 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 OR1L4Q8NGR5 311 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 HYLS1Q96M11 299 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 MS4A6AQ9H2W1 248 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 SMAD5-AS1Q9Y6J3 95 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 SORL1Q92673 2214 aa9.94□□□□□ -0.82
PDLIM7-212ENST00000504380 ELOA3CA0A087WX78 387 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms