RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 FAM110AQ9BQ89 295 aa18.74■□□□□ 0.59
LSM6-202ENST00000502781 MS4A6AQ9H2W1 248 aa18.74■□□□□ 0.59
LSM6-202ENST00000502781 HSPB11Q9Y547 144 aa18.74■□□□□ 0.59
LSM6-202ENST00000502781 UBE2L5PA0A1B0GUS4 154 aa18.73■□□□□ 0.59
LSM6-202ENST00000502781 HELTA6NFD8 242 aa18.73■□□□□ 0.59
LSM6-202ENST00000502781 RPL12P30050 165 aaKnown RBP18.73■□□□□ 0.59
LSM6-202ENST00000502781 CAMLGP49069 296 aa18.73■□□□□ 0.59
LSM6-202ENST00000502781 PAFAH1B2P68402 229 aa18.73■□□□□ 0.59
LSM6-202ENST00000502781 FGL1Q08830 312 aa18.73■□□□□ 0.59
LSM6-202ENST00000502781 Q5BKY6 102 aa18.73■□□□□ 0.59
LSM6-202ENST00000502781 IGKV3-7A0A075B6H7 116 aa18.72■□□□□ 0.59
LSM6-202ENST00000502781 OR11H12B2RN74 326 aa18.72■□□□□ 0.59
LSM6-202ENST00000502781 ORM2P19652 201 aa18.72■□□□□ 0.59
LSM6-202ENST00000502781 AP2S1P53680 142 aaPredicted RBP18.72■□□□□ 0.59
LSM6-202ENST00000502781 RAB31Q13636 194 aa18.72■□□□□ 0.59
LSM6-202ENST00000502781 ODF3L2Q3SX64 289 aa18.72■□□□□ 0.59
LSM6-202ENST00000502781 GBGT1Q8N5D6 347 aa18.72■□□□□ 0.59
LSM6-202ENST00000502781 GGTLC1Q9BX51 225 aa18.72■□□□□ 0.59
LSM6-202ENST00000502781 WFDC10AQ9H1F0 79 aa18.72■□□□□ 0.59
LSM6-202ENST00000502781 PRR20EP86478 221 aa18.71■□□□□ 0.59
LSM6-202ENST00000502781 PRR20CP86479 221 aa18.71■□□□□ 0.59
LSM6-202ENST00000502781 PRR20DP86480 221 aa18.71■□□□□ 0.59
LSM6-202ENST00000502781 PRR20BP86481 221 aa18.71■□□□□ 0.59
LSM6-202ENST00000502781 PRR20AP86496 221 aa18.71■□□□□ 0.59
LSM6-202ENST00000502781 PXDC1Q5TGL8 231 aa18.71■□□□□ 0.59
LSM6-202ENST00000502781 DEFB125Q8N687 156 aa18.71■□□□□ 0.59
LSM6-202ENST00000502781 OR1B1Q8NGR6 318 aa18.71■□□□□ 0.59
LSM6-202ENST00000502781 MPDU1O75352 247 aa18.7■□□□□ 0.58
LSM6-202ENST00000502781 FRMD6-AS1P0C7T7 363 aa18.7■□□□□ 0.58
LSM6-202ENST00000502781 TFPI2P48307 235 aa18.7■□□□□ 0.58
LSM6-202ENST00000502781 RPL11P62913 178 aaKnown RBP18.7■□□□□ 0.58
LSM6-202ENST00000502781 CLINT1Q14677 625 aa18.7■□□□□ 0.58
LSM6-202ENST00000502781 PATE2Q6UY27 113 aa18.7■□□□□ 0.58
LSM6-202ENST00000502781 SIGLEC15Q6ZMC9 328 aa18.7■□□□□ 0.58
LSM6-202ENST00000502781 DCANP1Q8TF63 244 aa18.7■□□□□ 0.58
LSM6-202ENST00000502781 ZNF98A6NK75 572 aa18.69■□□□□ 0.58
LSM6-202ENST00000502781 HYPMO75409 117 aa18.69■□□□□ 0.58
LSM6-202ENST00000502781 RPL29P47914 159 aaKnown RBP18.69■□□□□ 0.58
LSM6-202ENST00000502781 OPCMLQ14982 345 aa18.69■□□□□ 0.58
LSM6-202ENST00000502781 DOK5Q9P104 306 aa18.69■□□□□ 0.58
LSM6-202ENST00000502781 FBXL17Q9UF56 701 aa18.69■□□□□ 0.58
LSM6-202ENST00000502781 HIGD1AQ9Y241 93 aa18.69■□□□□ 0.58
LSM6-202ENST00000502781 DNAH9Q9NYC9 4486 aa18.69■□□□□ 0.58
LSM6-202ENST00000502781 G3V3Q6 166 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 H3BRN7 92 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 K7EQG2 157 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 DNASE2O00115 360 aaPredicted RBP18.68■□□□□ 0.58
LSM6-202ENST00000502781 FGF7P21781 194 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 MIC13Q5XKP0 118 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 LINC00322Q6ZN03 302 aaPredicted RBP18.68■□□□□ 0.58
LSM6-202ENST00000502781 STXBP6Q8NFX7 210 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 PPP1R14BQ96C90 147 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 ATP5SQ99766 215 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 SHANK2-AS3Q9BTD1 123 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 SLC25A39Q9BZJ4 359 aaPredicted RBP18.68■□□□□ 0.58
LSM6-202ENST00000502781 ARL6Q9H0F7 186 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 S100A7P31151 101 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 OR2T35Q8NGX2 323 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 AQP10Q96PS8 301 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 CITED4Q96RK1 184 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 UBQLN2Q9UHD9 624 aa18.68■□□□□ 0.58
LSM6-202ENST00000502781 OR5G3P0C626 314 aa18.67■□□□□ 0.58
LSM6-202ENST00000502781 CMC4P56277 68 aaPredicted RBP18.67■□□□□ 0.58
LSM6-202ENST00000502781 WFDC3Q8IUB2 231 aa18.67■□□□□ 0.58
LSM6-202ENST00000502781 OR8I2Q8N0Y5 310 aa18.67■□□□□ 0.58
LSM6-202ENST00000502781 NPCDR1Q9BY65 106 aa18.67■□□□□ 0.58
LSM6-202ENST00000502781 WDR61Q9GZS3 305 aaKnown RBP18.67■□□□□ 0.58
LSM6-202ENST00000502781 ARV1Q9H2C2 271 aa18.67■□□□□ 0.58
LSM6-202ENST00000502781 TUBA4BQ9H853 241 aa18.67■□□□□ 0.58
LSM6-202ENST00000502781 NRN1Q9NPD7 142 aa18.67■□□□□ 0.58
LSM6-202ENST00000502781 Q6ZNX1 250 aa18.66■□□□□ 0.58
LSM6-202ENST00000502781 FAM24BQ8N5W8 94 aa18.66■□□□□ 0.58
LSM6-202ENST00000502781 TMEM37Q8WXS4 190 aa18.66■□□□□ 0.58
LSM6-202ENST00000502781 UHRF2Q96PU4 802 aa18.66■□□□□ 0.58
LSM6-202ENST00000502781 SRD5A3Q9H8P0 318 aa18.66■□□□□ 0.58
LSM6-202ENST00000502781 MAP6D1Q9H9H5 199 aa18.66■□□□□ 0.58
LSM6-202ENST00000502781 TGP01266 2768 aa18.65■□□□□ 0.58
LSM6-202ENST00000502781 S100A7AQ86SG5 101 aa18.65■□□□□ 0.58
LSM6-202ENST00000502781 SCRT1Q9BWW7 348 aa18.65■□□□□ 0.58
LSM6-202ENST00000502781 SLC25A32Q9H2D1 315 aa18.65■□□□□ 0.58
LSM6-202ENST00000502781 WFDC1Q9HC57 220 aa18.65■□□□□ 0.58
LSM6-202ENST00000502781 SLC39A9Q9NUM3 307 aa18.65■□□□□ 0.58
LSM6-202ENST00000502781 ELOA3CA0A087WX78 387 aaPredicted RBP18.64■□□□□ 0.57
LSM6-202ENST00000502781 B2MP61769 119 aa18.64■□□□□ 0.57
LSM6-202ENST00000502781 Q6ZRG5 221 aa18.64■□□□□ 0.57
LSM6-202ENST00000502781 SBSPONQ8IVN8 264 aa18.64■□□□□ 0.57
LSM6-202ENST00000502781 GPR82Q96P67 336 aa18.64■□□□□ 0.57
LSM6-202ENST00000502781 SMIM3Q9BZL3 60 aa18.64■□□□□ 0.57
LSM6-202ENST00000502781 SEPSECSQ9HD40 501 aaKnown RBP18.64■□□□□ 0.57
LSM6-202ENST00000502781 PXMP4Q9Y6I8 212 aa18.64■□□□□ 0.57
LSM6-202ENST00000502781 RBMY1BA6NDE4 496 aaKnown RBP18.63■□□□□ 0.57
LSM6-202ENST00000502781 RBMY1EA6NEQ0 496 aaKnown RBP18.63■□□□□ 0.57
LSM6-202ENST00000502781 RBMY1DP0C7P1 496 aaKnown RBP18.63■□□□□ 0.57
LSM6-202ENST00000502781 LEMD1Q68G75 181 aa18.63■□□□□ 0.57
LSM6-202ENST00000502781 C17orf77Q96MU5 243 aa18.63■□□□□ 0.57
LSM6-202ENST00000502781 PARD6GQ9BYG4 376 aaPredicted RBP18.63■□□□□ 0.57
LSM6-202ENST00000502781 SLC25A22Q9H936 323 aa18.63■□□□□ 0.57
LSM6-202ENST00000502781 RNF222A6NCQ9 220 aa18.62■□□□□ 0.57
LSM6-202ENST00000502781 COX7A2P2O60397 106 aa18.62■□□□□ 0.57
LSM6-202ENST00000502781 LINC00305Q7Z4B0 112 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms