RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 LINC01006Q8NI28 216 aa10.42□□□□□ -0.74
SGCA-203ENST00000502555 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
SGCA-203ENST00000502555 ZNF414Q96IQ9 312 aa10.42□□□□□ -0.74
SGCA-203ENST00000502555 SHANK2-AS3Q9BTD1 123 aa10.42□□□□□ -0.74
SGCA-203ENST00000502555 PEF1Q9UBV8 284 aaKnown RBP10.42□□□□□ -0.74
SGCA-203ENST00000502555 PPP5D1E7EU14 171 aa10.41□□□□□ -0.74
SGCA-203ENST00000502555 GGCTO75223 188 aaKnown RBP10.41□□□□□ -0.74
SGCA-203ENST00000502555 EIF3GO75821 320 aaKnown RBP eCLIP10.41□□□□□ -0.74
SGCA-203ENST00000502555 TOMM20LQ6UXN7 152 aa10.41□□□□□ -0.74
SGCA-203ENST00000502555 WFDC12Q8WWY7 111 aa10.41□□□□□ -0.74
SGCA-203ENST00000502555 FAM167A-AS1Q96KT0 104 aa10.41□□□□□ -0.74
SGCA-203ENST00000502555 UHRF2Q96PU4 802 aa10.41□□□□□ -0.74
SGCA-203ENST00000502555 SLC25A2Q9BXI2 301 aa10.41□□□□□ -0.74
SGCA-203ENST00000502555 SLC25A39Q9BZJ4 359 aaPredicted RBP10.41□□□□□ -0.74
SGCA-203ENST00000502555 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
SGCA-203ENST00000502555 MANBALQ9NQG1 85 aa10.41□□□□□ -0.74
SGCA-203ENST00000502555 GNG13Q9P2W3 67 aa10.41□□□□□ -0.74
SGCA-203ENST00000502555 H3BRN7 92 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 NDUFA4O00483 81 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 OR7C2O60412 319 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 ATP6V1G1O75348 118 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 TRBV12-3P01733 135 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 BCL2P10415 239 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 GCHFRP30047 84 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 CDX1P47902 265 aaPredicted RBP10.4□□□□□ -0.74
SGCA-203ENST00000502555 GUK1Q16774 197 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 MORN5Q5VZ52 161 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 IQCF2Q8IXL9 164 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 CITED4Q96RK1 184 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 SMDT1Q9H4I9 107 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 TMEM167BQ9NRX6 74 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 RABAC1Q9UI14 185 aa10.4□□□□□ -0.74
SGCA-203ENST00000502555 ANKRD34BA5PLL1 514 aa10.39□□□□□ -0.75
SGCA-203ENST00000502555 RBFOX3A6NFN3 312 aa10.39□□□□□ -0.75
SGCA-203ENST00000502555 PEA15Q15121 130 aa10.39□□□□□ -0.75
SGCA-203ENST00000502555 TCTEX1D4Q5JR98 221 aa10.39□□□□□ -0.75
SGCA-203ENST00000502555 TOR2AQ5JU69 321 aa10.39□□□□□ -0.75
SGCA-203ENST00000502555 ZNF506Q5JVG8 444 aa10.39□□□□□ -0.75
SGCA-203ENST00000502555 C4orf3Q8WVX3 66 aa10.39□□□□□ -0.75
SGCA-203ENST00000502555 SCRT1Q9BWW7 348 aa10.39□□□□□ -0.75
SGCA-203ENST00000502555 ARL2-SNX15V9GYD0 113 aa10.39□□□□□ -0.75
SGCA-203ENST00000502555 TRAV5A0A0B4J249 113 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 IGHV3-35A0A0C4DH35 117 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 LOC102723971A0A1B0GUV8 181 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 CLPSL1A2RUU4 121 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 CD5P06127 495 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 UBE2L3P68036 154 aaKnown RBP10.38□□□□□ -0.75
SGCA-203ENST00000502555 SUN5Q8TC36 379 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 TMEM190Q8WZ59 177 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 ZNF503Q96F45 646 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 OR5B12Q96R08 314 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 METTL26Q96S19 204 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 PAXXQ9BUH6 204 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 EIF5A2Q9GZV4 153 aaKnown RBP10.38□□□□□ -0.75
SGCA-203ENST00000502555 OR51M1Q9H341 326 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 TMPRSS5Q9H3S3 457 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 TMEM14CQ9P0S9 112 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 VAX2Q9UIW0 290 aa10.38□□□□□ -0.75
SGCA-203ENST00000502555 A0A1B0GUS0 222 aa10.37□□□□□ -0.75
SGCA-203ENST00000502555 ZNF98A6NK75 572 aa10.37□□□□□ -0.75
SGCA-203ENST00000502555 I3L521 148 aa10.37□□□□□ -0.75
SGCA-203ENST00000502555 NDUFS6O75380 124 aaKnown RBP10.37□□□□□ -0.75
SGCA-203ENST00000502555 PROK1P58294 105 aa10.37□□□□□ -0.75
SGCA-203ENST00000502555 HAGHQ16775 308 aa10.37□□□□□ -0.75
SGCA-203ENST00000502555 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
SGCA-203ENST00000502555 TREM1Q9NP99 234 aa10.37□□□□□ -0.75
SGCA-203ENST00000502555 RNF114Q9Y508 228 aa10.37□□□□□ -0.75
SGCA-203ENST00000502555 ANK3Q12955 4377 aaKnown RBP10.37□□□□□ -0.75
SGCA-203ENST00000502555 HSPB1P04792 205 aaKnown RBP10.36□□□□□ -0.75
SGCA-203ENST00000502555 GP9P14770 177 aa10.36□□□□□ -0.75
SGCA-203ENST00000502555 CRYBB3P26998 211 aa10.36□□□□□ -0.75
SGCA-203ENST00000502555 SRSF3P84103 164 aaKnown RBP10.36□□□□□ -0.75
SGCA-203ENST00000502555 ICAM4Q14773 271 aa10.36□□□□□ -0.75
SGCA-203ENST00000502555 RPEL1Q2QD12 228 aa10.36□□□□□ -0.75
SGCA-203ENST00000502555 FAM106AQ4KMX7 169 aa10.36□□□□□ -0.75
SGCA-203ENST00000502555 BPIFA4PQ86YQ2 179 aa10.36□□□□□ -0.75
SGCA-203ENST00000502555 FXYD5Q96DB9 178 aa10.36□□□□□ -0.75
SGCA-203ENST00000502555 TXNDC17Q9BRA2 123 aa10.36□□□□□ -0.75
SGCA-203ENST00000502555 PAGE4O60829 102 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 OR10J4P0C629 311 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 PYYP10082 97 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 RPL7P18124 248 aaKnown RBP10.35□□□□□ -0.75
SGCA-203ENST00000502555 ZP3P21754 424 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 S100A1P23297 94 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 NPPCP23582 126 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 MEF2BQ02080 365 aaPredicted RBP10.35□□□□□ -0.75
SGCA-203ENST00000502555 KHDC1LQ5JSQ8 128 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 C1orf194Q5T5A4 169 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 LEMD1Q68G75 181 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 UNQ9165/PRO28630Q6UXU0 137 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 NARS2Q96I59 477 aaKnown RBP10.35□□□□□ -0.75
SGCA-203ENST00000502555 GPR82Q96P67 336 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 RARRES2Q99969 163 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 C20orf24Q9BUV8 137 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 TMEM231Q9H6L2 316 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 U3KQE9 123 aa10.35□□□□□ -0.75
SGCA-203ENST00000502555 IGHV3OR16-8A0A075B7F1 116 aa10.34□□□□□ -0.75
SGCA-203ENST00000502555 A0A1W2PRE2 83 aa10.34□□□□□ -0.75
SGCA-203ENST00000502555 KRBOX1C9JBD0 128 aa10.34□□□□□ -0.75
SGCA-203ENST00000502555 K7EMT4 169 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms