RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 SLC24A4Q8NFF2 622 aa6.32□□□□□ -1.4
CCDC171-209ENST00000498725 RNASEH2CQ8TDP1 164 aaKnown RBP6.32□□□□□ -1.4
CCDC171-209ENST00000498725 TMEM170AQ8WVE7 144 aa6.32□□□□□ -1.4
CCDC171-209ENST00000498725 GNPNAT1Q96EK6 184 aaPredicted RBP6.32□□□□□ -1.4
CCDC171-209ENST00000498725 SLC25A39Q9BZJ4 359 aaPredicted RBP6.32□□□□□ -1.4
CCDC171-209ENST00000498725 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
CCDC171-209ENST00000498725 TRAV26-1A0A087WT03 109 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 PLAC8L1A1L4L8 177 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 ZFP92A6NM28 416 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 ISLRO14498 428 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 RCVRNP35243 200 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 NUP62P37198 522 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-209ENST00000498725 GABARAPL2P60520 117 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 RND3P61587 244 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 SUPT4H1P63272 117 aaKnown RBP6.31□□□□□ -1.4
CCDC171-209ENST00000498725 ESRGQ1W209 222 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 ARRDC1Q8N5I2 433 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 OR11H7Q8NGC8 314 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 GPX8Q8TED1 209 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 LINC01587Q99440 93 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 SLC25A22Q9H936 323 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-209ENST00000498725 COPZ2Q9P299 210 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 CACNG5Q9UF02 275 aa6.31□□□□□ -1.4
CCDC171-209ENST00000498725 SCO2A0A1W2PP80 73 aa6.3□□□□□ -1.4
CCDC171-209ENST00000498725 EREGO14944 169 aa6.3□□□□□ -1.4
CCDC171-209ENST00000498725 CRXO43186 299 aaPredicted RBP6.3□□□□□ -1.4
CCDC171-209ENST00000498725 DNAH10OSP0CZ25 163 aa6.3□□□□□ -1.4
CCDC171-209ENST00000498725 CNN1P51911 297 aaKnown RBP6.3□□□□□ -1.4
CCDC171-209ENST00000498725 KRTAP10-1P60331 282 aa6.3□□□□□ -1.4
CCDC171-209ENST00000498725 LSM3P62310 102 aaKnown RBP6.3□□□□□ -1.4
CCDC171-209ENST00000498725 FGL1Q08830 312 aa6.3□□□□□ -1.4
CCDC171-209ENST00000498725 KLF9Q13886 244 aaPredicted RBP6.3□□□□□ -1.4
CCDC171-209ENST00000498725 OR8G2PQ6IF36 304 aa6.3□□□□□ -1.4
CCDC171-209ENST00000498725 RNF182Q8N6D2 247 aa6.3□□□□□ -1.4
CCDC171-209ENST00000498725 C17orf77Q96MU5 243 aa6.3□□□□□ -1.4
CCDC171-209ENST00000498725 RSG1Q9BU20 258 aa6.3□□□□□ -1.4
CCDC171-209ENST00000498725 NOP10Q9NPE3 64 aaKnown RBP6.3□□□□□ -1.4
CCDC171-209ENST00000498725 TNFRSF18Q9Y5U5 241 aa6.3□□□□□ -1.4
CCDC171-209ENST00000498725 SMIM31A0A1B0GVY4 71 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
CCDC171-209ENST00000498725 IFNA5P01569 189 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 OR5AC1P0C628 307 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 ZNF182P17025 639 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-209ENST00000498725 UCP1P25874 307 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 RPS19P39019 145 aaKnown RBP6.29□□□□□ -1.4
CCDC171-209ENST00000498725 ERVFC1-1P60608 527 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 RHOBP62745 196 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 NEDD8Q15843 81 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 SCGB2B2Q4G0G5 96 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 RNASE10Q5GAN6 216 aaKnown RBP6.29□□□□□ -1.4
CCDC171-209ENST00000498725 CCDC71LQ8N9Z2 235 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 LHFPL5Q8TAF8 219 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 MARCH1Q8TCQ1 289 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 ZNF486Q96H40 463 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-209ENST00000498725 SLC25A32Q9H2D1 315 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 PPP1R14DQ9NXH3 145 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 COMMD3Q9UBI1 195 aa6.29□□□□□ -1.4
CCDC171-209ENST00000498725 TIMM8BQ9Y5J9 83 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-209ENST00000498725 FLG2Q5D862 2391 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-209ENST00000498725 IGKV1D-37A0A075B6S9 117 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 GAGE12BA1L429 117 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 ZNF701M0R085 212 aaPredicted RBP6.28□□□□□ -1.4
CCDC171-209ENST00000498725 GAGE7O76087 117 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 CD3DP04234 171 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 GAGE12FP0CL80 117 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 GAGE12GP0CL81 117 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 GAGE12IP0CL82 117 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 M6PRP20645 277 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 HOXA5P20719 270 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 TSPOP30536 169 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 GALR1P47211 349 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 ICAM4Q14773 271 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 C1orf194Q5T5A4 169 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 Q6ZRN7 208 aaPredicted RBP6.28□□□□□ -1.4
CCDC171-209ENST00000498725 GPR141Q7Z602 305 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 SELENOHQ8IZQ5 122 aaKnown RBP6.28□□□□□ -1.4
CCDC171-209ENST00000498725 ZNF738Q8NE65 137 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 OR13C8Q8NGS7 320 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 OR52E5Q8NH55 327 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 ZFAND1Q8TCF1 268 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 RXFP4Q8TDU9 374 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 SLC35E1Q96K37 410 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 MRPS16Q9Y3D3 137 aaKnown RBP6.28□□□□□ -1.4
CCDC171-209ENST00000498725 VPS13BQ7Z7G8 4022 aa6.28□□□□□ -1.4
CCDC171-209ENST00000498725 SRRM2Q9UQ35 2752 aaKnown RBP6.28□□□□□ -1.4
CCDC171-209ENST00000498725 TEX13DA0A0J9YY54 714 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-209ENST00000498725 A0A1W2PPQ1 181 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 A8MTW9 85 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 SNRPGP15A8MWD9 76 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 BOLA2-SMG1P6H3BVE0 249 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 GABARAPH6UMI1 98 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 GABARAPO95166 117 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 TNFAIP8O95379 198 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 MEOX2P50222 304 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 B2MP61769 119 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 HIST1H1AQ02539 215 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-209ENST00000498725 GAMTQ14353 236 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 NMSQ5H8A3 153 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms